Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SPG11Q96JI7 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SPG11Q96JI7 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SPG11Q96JI7 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.13■□□□□ 0.81
SPG11Q96JI7 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SPG11Q96JI7 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.13■□□□□ 0.81
SPG11Q96JI7 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SPG11Q96JI7 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SPG11Q96JI7 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SPG11Q96JI7 MIR939-201ENST00000401314 82 ntBASIC20.12■□□□□ 0.81
SPG11Q96JI7 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.12■□□□□ 0.81
SPG11Q96JI7 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
SPG11Q96JI7 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SPG11Q96JI7 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.11■□□□□ 0.81
SPG11Q96JI7 AP001330.3-201ENST00000520123 633 ntBASIC20.11■□□□□ 0.81
SPG11Q96JI7 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.11■□□□□ 0.81
SPG11Q96JI7 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
SPG11Q96JI7 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SPG11Q96JI7 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SPG11Q96JI7 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SPG11Q96JI7 SNX5-217ENST00000606557 1087 ntBASIC20.11■□□□□ 0.81
SPG11Q96JI7 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SPG11Q96JI7 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.1■□□□□ 0.81
SPG11Q96JI7 AL136162.1-201ENST00000607711 1078 ntBASIC20.1■□□□□ 0.81
SPG11Q96JI7 AL136967.2-201ENST00000623968 743 ntBASIC20.1■□□□□ 0.81
SPG11Q96JI7 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC20.09■□□□□ 0.81
SPG11Q96JI7 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SPG11Q96JI7 RASA4CP-201ENST00000424092 1398 ntBASIC20.09■□□□□ 0.81
SPG11Q96JI7 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SPG11Q96JI7 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SPG11Q96JI7 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SPG11Q96JI7 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.08■□□□□ 0.81
SPG11Q96JI7 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
SPG11Q96JI7 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC20.08■□□□□ 0.8
SPG11Q96JI7 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.07■□□□□ 0.8
SPG11Q96JI7 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.07■□□□□ 0.8
SPG11Q96JI7 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
SPG11Q96JI7 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.07■□□□□ 0.8
SPG11Q96JI7 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
SPG11Q96JI7 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.06■□□□□ 0.8
SPG11Q96JI7 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.06■□□□□ 0.8
SPG11Q96JI7 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.05■□□□□ 0.8
SPG11Q96JI7 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SPG11Q96JI7 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SPG11Q96JI7 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SPG11Q96JI7 AC090192.1-201ENST00000517740 490 ntBASIC20.05■□□□□ 0.8
SPG11Q96JI7 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.05■□□□□ 0.8
SPG11Q96JI7 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SPG11Q96JI7 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.05■□□□□ 0.8
SPG11Q96JI7 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SPG11Q96JI7 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.04■□□□□ 0.8
SPG11Q96JI7 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.04■□□□□ 0.8
SPG11Q96JI7 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.04■□□□□ 0.8
SPG11Q96JI7 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
SPG11Q96JI7 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SPG11Q96JI7 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC20.04■□□□□ 0.8
SPG11Q96JI7 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SPG11Q96JI7 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SPG11Q96JI7 AC091305.1-201ENST00000479476 895 ntBASIC20.04■□□□□ 0.8
SPG11Q96JI7 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.04■□□□□ 0.8
SPG11Q96JI7 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.04■□□□□ 0.8
SPG11Q96JI7 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SPG11Q96JI7 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.03■□□□□ 0.8
SPG11Q96JI7 AC034268.1-201ENST00000441047 882 ntBASIC20.03■□□□□ 0.8
SPG11Q96JI7 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.03■□□□□ 0.8
SPG11Q96JI7 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC20.03■□□□□ 0.8
SPG11Q96JI7 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.03■□□□□ 0.8
SPG11Q96JI7 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SPG11Q96JI7 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SPG11Q96JI7 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.03■□□□□ 0.8
SPG11Q96JI7 SYT6-210ENST00000641643 1587 ntBASIC20.03■□□□□ 0.8
SPG11Q96JI7 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SPG11Q96JI7 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
SPG11Q96JI7 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SPG11Q96JI7 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
SPG11Q96JI7 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
SPG11Q96JI7 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SPG11Q96JI7 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SPG11Q96JI7 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SPG11Q96JI7 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
SPG11Q96JI7 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.01■□□□□ 0.79
SPG11Q96JI7 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.01■□□□□ 0.79
SPG11Q96JI7 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SPG11Q96JI7 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
SPG11Q96JI7 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
SPG11Q96JI7 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SPG11Q96JI7 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20■□□□□ 0.79
SPG11Q96JI7 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20■□□□□ 0.79
SPG11Q96JI7 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
SPG11Q96JI7 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
SPG11Q96JI7 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20■□□□□ 0.79
SPG11Q96JI7 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20■□□□□ 0.79
SPG11Q96JI7 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SPG11Q96JI7 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SPG11Q96JI7 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SPG11Q96JI7 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
SPG11Q96JI7 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SPG11Q96JI7 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SPG11Q96JI7 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SPG11Q96JI7 SRD5A1P1-201ENST00000442297 786 ntBASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms