Protein–RNA interactions for Protein: Q96BD0

SLCO4A1, Solute carrier organic anion transporter family member 4A1, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLCO4A1Q96BD0 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC22.03■■□□□ 1.12
SLCO4A1Q96BD0 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
SLCO4A1Q96BD0 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
SLCO4A1Q96BD0 MIR6089-201ENST00000616698 64 ntBASIC22.03■■□□□ 1.12
SLCO4A1Q96BD0 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
SLCO4A1Q96BD0 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
SLCO4A1Q96BD0 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SLCO4A1Q96BD0 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SLCO4A1Q96BD0 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SLCO4A1Q96BD0 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
SLCO4A1Q96BD0 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC22.02■■□□□ 1.11
SLCO4A1Q96BD0 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC22.02■■□□□ 1.11
SLCO4A1Q96BD0 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SLCO4A1Q96BD0 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
SLCO4A1Q96BD0 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC22.01■■□□□ 1.11
SLCO4A1Q96BD0 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC22.01■■□□□ 1.11
SLCO4A1Q96BD0 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SLCO4A1Q96BD0 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC22.01■■□□□ 1.11
SLCO4A1Q96BD0 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SLCO4A1Q96BD0 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SLCO4A1Q96BD0 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SLCO4A1Q96BD0 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SLCO4A1Q96BD0 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SLCO4A1Q96BD0 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
SLCO4A1Q96BD0 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
SLCO4A1Q96BD0 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SLCO4A1Q96BD0 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC22■■□□□ 1.11
SLCO4A1Q96BD0 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC22■■□□□ 1.11
SLCO4A1Q96BD0 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC22■■□□□ 1.11
SLCO4A1Q96BD0 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC22■■□□□ 1.11
SLCO4A1Q96BD0 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SLCO4A1Q96BD0 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.99■■□□□ 1.11
SLCO4A1Q96BD0 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SLCO4A1Q96BD0 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
SLCO4A1Q96BD0 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SLCO4A1Q96BD0 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC21.99■■□□□ 1.11
SLCO4A1Q96BD0 AC008813.1-201ENST00000536597 885 ntBASIC21.99■■□□□ 1.11
SLCO4A1Q96BD0 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
SLCO4A1Q96BD0 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
SLCO4A1Q96BD0 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.99■■□□□ 1.11
SLCO4A1Q96BD0 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SLCO4A1Q96BD0 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SLCO4A1Q96BD0 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.98■■□□□ 1.11
SLCO4A1Q96BD0 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SLCO4A1Q96BD0 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
SLCO4A1Q96BD0 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
SLCO4A1Q96BD0 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC21.98■■□□□ 1.11
SLCO4A1Q96BD0 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.98■■□□□ 1.11
SLCO4A1Q96BD0 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC21.98■■□□□ 1.11
SLCO4A1Q96BD0 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SLCO4A1Q96BD0 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.98■■□□□ 1.11
SLCO4A1Q96BD0 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SLCO4A1Q96BD0 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.98■■□□□ 1.11
SLCO4A1Q96BD0 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SLCO4A1Q96BD0 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SLCO4A1Q96BD0 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SLCO4A1Q96BD0 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
SLCO4A1Q96BD0 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC21.97■■□□□ 1.11
SLCO4A1Q96BD0 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SLCO4A1Q96BD0 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC21.97■■□□□ 1.11
SLCO4A1Q96BD0 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC21.97■■□□□ 1.11
SLCO4A1Q96BD0 HGH1-207ENST00000628266 258 ntTSL 5 BASIC21.97■■□□□ 1.11
SLCO4A1Q96BD0 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SLCO4A1Q96BD0 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
SLCO4A1Q96BD0 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SLCO4A1Q96BD0 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SLCO4A1Q96BD0 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
SLCO4A1Q96BD0 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SLCO4A1Q96BD0 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SLCO4A1Q96BD0 CHST11-203ENST00000547956 936 ntTSL 2 BASIC21.96■■□□□ 1.11
SLCO4A1Q96BD0 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.96■■□□□ 1.11
SLCO4A1Q96BD0 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
SLCO4A1Q96BD0 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SLCO4A1Q96BD0 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SLCO4A1Q96BD0 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
SLCO4A1Q96BD0 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
SLCO4A1Q96BD0 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.95■■□□□ 1.1
SLCO4A1Q96BD0 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SLCO4A1Q96BD0 EP400NL-214ENST00000641289 2402 ntBASIC21.95■■□□□ 1.1
SLCO4A1Q96BD0 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC21.95■■□□□ 1.1
SLCO4A1Q96BD0 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
SLCO4A1Q96BD0 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
SLCO4A1Q96BD0 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SLCO4A1Q96BD0 HLA-L-211ENST00000482052 1765 ntBASIC21.94■■□□□ 1.1
SLCO4A1Q96BD0 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
SLCO4A1Q96BD0 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
SLCO4A1Q96BD0 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SLCO4A1Q96BD0 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.94■■□□□ 1.1
SLCO4A1Q96BD0 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.94■■□□□ 1.1
SLCO4A1Q96BD0 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.94■■□□□ 1.1
SLCO4A1Q96BD0 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SLCO4A1Q96BD0 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
SLCO4A1Q96BD0 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SLCO4A1Q96BD0 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.93■■□□□ 1.1
SLCO4A1Q96BD0 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.93■■□□□ 1.1
SLCO4A1Q96BD0 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.93■■□□□ 1.1
SLCO4A1Q96BD0 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.93■■□□□ 1.1
SLCO4A1Q96BD0 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SLCO4A1Q96BD0 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.92■■□□□ 1.1
SLCO4A1Q96BD0 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms