Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 ECEL1P2-201ENST00000461596 1295 ntBASIC21.09■□□□□ 0.97
PTP4A1Q93096 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PTP4A1Q93096 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.09■□□□□ 0.97
PTP4A1Q93096 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PTP4A1Q93096 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
PTP4A1Q93096 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PTP4A1Q93096 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PTP4A1Q93096 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PTP4A1Q93096 AC004812.2-201ENST00000611079 2094 ntBASIC21.08■□□□□ 0.97
PTP4A1Q93096 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.08■□□□□ 0.97
PTP4A1Q93096 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PTP4A1Q93096 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PTP4A1Q93096 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PTP4A1Q93096 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC21.07■□□□□ 0.96
PTP4A1Q93096 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.07■□□□□ 0.96
PTP4A1Q93096 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
PTP4A1Q93096 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PTP4A1Q93096 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.06■□□□□ 0.96
PTP4A1Q93096 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PTP4A1Q93096 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PTP4A1Q93096 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PTP4A1Q93096 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PTP4A1Q93096 MIR6089-201ENST00000616698 64 ntBASIC21.06■□□□□ 0.96
PTP4A1Q93096 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.06■□□□□ 0.96
PTP4A1Q93096 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PTP4A1Q93096 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PTP4A1Q93096 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTP4A1Q93096 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PTP4A1Q93096 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTP4A1Q93096 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTP4A1Q93096 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTP4A1Q93096 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC21.04■□□□□ 0.96
PTP4A1Q93096 RP9P-202ENST00000450133 1212 ntBASIC21.04■□□□□ 0.96
PTP4A1Q93096 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PTP4A1Q93096 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PTP4A1Q93096 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
PTP4A1Q93096 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PTP4A1Q93096 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.04■□□□□ 0.96
PTP4A1Q93096 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PTP4A1Q93096 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
PTP4A1Q93096 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.03■□□□□ 0.96
PTP4A1Q93096 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PTP4A1Q93096 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.03■□□□□ 0.96
PTP4A1Q93096 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.03■□□□□ 0.96
PTP4A1Q93096 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PTP4A1Q93096 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.03■□□□□ 0.96
PTP4A1Q93096 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.03■□□□□ 0.96
PTP4A1Q93096 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
PTP4A1Q93096 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
PTP4A1Q93096 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PTP4A1Q93096 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC21.02■□□□□ 0.96
PTP4A1Q93096 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
PTP4A1Q93096 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.95
PTP4A1Q93096 AC133561.1-201ENST00000568600 2415 ntBASIC21.02■□□□□ 0.95
PTP4A1Q93096 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PTP4A1Q93096 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PTP4A1Q93096 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PTP4A1Q93096 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
PTP4A1Q93096 AC093536.1-201ENST00000569153 554 ntBASIC21.01■□□□□ 0.95
PTP4A1Q93096 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PTP4A1Q93096 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PTP4A1Q93096 RNF126P1-201ENST00000567452 1320 ntBASIC21.01■□□□□ 0.95
PTP4A1Q93096 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
PTP4A1Q93096 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PTP4A1Q93096 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PTP4A1Q93096 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21■□□□□ 0.95
PTP4A1Q93096 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21■□□□□ 0.95
PTP4A1Q93096 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC21■□□□□ 0.95
PTP4A1Q93096 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21■□□□□ 0.95
PTP4A1Q93096 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PTP4A1Q93096 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21■□□□□ 0.95
PTP4A1Q93096 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21■□□□□ 0.95
PTP4A1Q93096 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTP4A1Q93096 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
PTP4A1Q93096 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.99■□□□□ 0.95
PTP4A1Q93096 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTP4A1Q93096 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
PTP4A1Q93096 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PTP4A1Q93096 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PTP4A1Q93096 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PTP4A1Q93096 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
PTP4A1Q93096 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
PTP4A1Q93096 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PTP4A1Q93096 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.98■□□□□ 0.95
PTP4A1Q93096 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PTP4A1Q93096 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PTP4A1Q93096 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
PTP4A1Q93096 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PTP4A1Q93096 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PTP4A1Q93096 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
PTP4A1Q93096 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PTP4A1Q93096 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
PTP4A1Q93096 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
PTP4A1Q93096 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTP4A1Q93096 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTP4A1Q93096 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PTP4A1Q93096 HSD17B1P1-201ENST00000590052 955 ntBASIC20.97■□□□□ 0.95
PTP4A1Q93096 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.97■□□□□ 0.95
PTP4A1Q93096 HLA-L-211ENST00000482052 1765 ntBASIC20.97■□□□□ 0.95
PTP4A1Q93096 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms