Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
NPIPB3Q92617 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC18.43■□□□□ 0.54
NPIPB3Q92617 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
NPIPB3Q92617 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NPIPB3Q92617 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC18.43■□□□□ 0.54
NPIPB3Q92617 LSR-205ENST00000427250 1606 ntTSL 2 BASIC18.43■□□□□ 0.54
NPIPB3Q92617 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NPIPB3Q92617 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NPIPB3Q92617 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC18.43■□□□□ 0.54
NPIPB3Q92617 CEP120-209ENST00000515110 606 ntTSL 3 BASIC18.43■□□□□ 0.54
NPIPB3Q92617 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC18.43■□□□□ 0.54
NPIPB3Q92617 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NPIPB3Q92617 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC18.43■□□□□ 0.54
NPIPB3Q92617 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NPIPB3Q92617 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
NPIPB3Q92617 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NPIPB3Q92617 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC18.42■□□□□ 0.54
NPIPB3Q92617 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NPIPB3Q92617 MIR6089-201ENST00000616698 64 ntBASIC18.42■□□□□ 0.54
NPIPB3Q92617 SRP68-213ENST00000629930 165 ntTSL 5 BASIC18.42■□□□□ 0.54
NPIPB3Q92617 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NPIPB3Q92617 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NPIPB3Q92617 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NPIPB3Q92617 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC18.42■□□□□ 0.54
NPIPB3Q92617 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NPIPB3Q92617 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NPIPB3Q92617 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NPIPB3Q92617 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
NPIPB3Q92617 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC18.41■□□□□ 0.54
NPIPB3Q92617 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NPIPB3Q92617 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
NPIPB3Q92617 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
NPIPB3Q92617 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NPIPB3Q92617 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NPIPB3Q92617 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NPIPB3Q92617 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NPIPB3Q92617 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NPIPB3Q92617 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC18.4■□□□□ 0.54
NPIPB3Q92617 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
NPIPB3Q92617 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NPIPB3Q92617 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC18.4■□□□□ 0.54
NPIPB3Q92617 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
NPIPB3Q92617 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NPIPB3Q92617 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC18.4■□□□□ 0.54
NPIPB3Q92617 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NPIPB3Q92617 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
NPIPB3Q92617 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
NPIPB3Q92617 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NPIPB3Q92617 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
NPIPB3Q92617 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC18.39■□□□□ 0.53
NPIPB3Q92617 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC18.39■□□□□ 0.53
NPIPB3Q92617 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NPIPB3Q92617 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC18.39■□□□□ 0.53
NPIPB3Q92617 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NPIPB3Q92617 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NPIPB3Q92617 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NPIPB3Q92617 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NPIPB3Q92617 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC18.38■□□□□ 0.53
NPIPB3Q92617 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NPIPB3Q92617 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC18.38■□□□□ 0.53
NPIPB3Q92617 AC007029.1-201ENST00000604183 313 ntBASIC18.38■□□□□ 0.53
NPIPB3Q92617 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NPIPB3Q92617 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
NPIPB3Q92617 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC18.38■□□□□ 0.53
NPIPB3Q92617 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NPIPB3Q92617 CASK-201ENST00000378154 2494 ntTSL 5 BASIC18.38■□□□□ 0.53
NPIPB3Q92617 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
NPIPB3Q92617 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NPIPB3Q92617 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC18.37■□□□□ 0.53
NPIPB3Q92617 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
NPIPB3Q92617 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPIPB3Q92617 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NPIPB3Q92617 AC004812.2-201ENST00000611079 2094 ntBASIC18.37■□□□□ 0.53
NPIPB3Q92617 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NPIPB3Q92617 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPIPB3Q92617 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPIPB3Q92617 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NPIPB3Q92617 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
NPIPB3Q92617 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPIPB3Q92617 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NPIPB3Q92617 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPIPB3Q92617 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPIPB3Q92617 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NPIPB3Q92617 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NPIPB3Q92617 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
NPIPB3Q92617 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NPIPB3Q92617 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC18.36■□□□□ 0.53
NPIPB3Q92617 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
NPIPB3Q92617 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPIPB3Q92617 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPIPB3Q92617 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPIPB3Q92617 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
NPIPB3Q92617 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
NPIPB3Q92617 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NPIPB3Q92617 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPIPB3Q92617 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPIPB3Q92617 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPIPB3Q92617 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.35■□□□□ 0.53
NPIPB3Q92617 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NPIPB3Q92617 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms