Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RTN4IP1Q8WWV3 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
RTN4IP1Q8WWV3 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RTN4IP1Q8WWV3 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RTN4IP1Q8WWV3 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RTN4IP1Q8WWV3 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RTN4IP1Q8WWV3 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RTN4IP1Q8WWV3 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC19.63■□□□□ 0.73
RTN4IP1Q8WWV3 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC19.63■□□□□ 0.73
RTN4IP1Q8WWV3 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC19.63■□□□□ 0.73
RTN4IP1Q8WWV3 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
RTN4IP1Q8WWV3 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RTN4IP1Q8WWV3 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RTN4IP1Q8WWV3 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RTN4IP1Q8WWV3 AC141586.4-201ENST00000624558 1573 ntBASIC19.62■□□□□ 0.73
RTN4IP1Q8WWV3 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RTN4IP1Q8WWV3 RNF126P1-201ENST00000567452 1320 ntBASIC19.62■□□□□ 0.73
RTN4IP1Q8WWV3 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
RTN4IP1Q8WWV3 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RTN4IP1Q8WWV3 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC19.62■□□□□ 0.73
RTN4IP1Q8WWV3 AC007029.1-201ENST00000604183 313 ntBASIC19.62■□□□□ 0.73
RTN4IP1Q8WWV3 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RTN4IP1Q8WWV3 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.62■□□□□ 0.73
RTN4IP1Q8WWV3 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.61■□□□□ 0.73
RTN4IP1Q8WWV3 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTN4IP1Q8WWV3 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC19.61■□□□□ 0.73
RTN4IP1Q8WWV3 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
RTN4IP1Q8WWV3 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTN4IP1Q8WWV3 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RTN4IP1Q8WWV3 RP9P-202ENST00000450133 1212 ntBASIC19.61■□□□□ 0.73
RTN4IP1Q8WWV3 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
RTN4IP1Q8WWV3 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTN4IP1Q8WWV3 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTN4IP1Q8WWV3 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
RTN4IP1Q8WWV3 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
RTN4IP1Q8WWV3 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTN4IP1Q8WWV3 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTN4IP1Q8WWV3 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTN4IP1Q8WWV3 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
RTN4IP1Q8WWV3 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RTN4IP1Q8WWV3 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RTN4IP1Q8WWV3 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RTN4IP1Q8WWV3 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.6■□□□□ 0.73
RTN4IP1Q8WWV3 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RTN4IP1Q8WWV3 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RTN4IP1Q8WWV3 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RTN4IP1Q8WWV3 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RTN4IP1Q8WWV3 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC19.6■□□□□ 0.73
RTN4IP1Q8WWV3 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RTN4IP1Q8WWV3 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RTN4IP1Q8WWV3 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC19.59■□□□□ 0.73
RTN4IP1Q8WWV3 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTN4IP1Q8WWV3 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTN4IP1Q8WWV3 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTN4IP1Q8WWV3 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTN4IP1Q8WWV3 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RTN4IP1Q8WWV3 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTN4IP1Q8WWV3 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RTN4IP1Q8WWV3 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC19.59■□□□□ 0.73
RTN4IP1Q8WWV3 AC068473.5-201ENST00000616428 2072 ntBASIC19.59■□□□□ 0.73
RTN4IP1Q8WWV3 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RTN4IP1Q8WWV3 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTN4IP1Q8WWV3 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTN4IP1Q8WWV3 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
RTN4IP1Q8WWV3 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
RTN4IP1Q8WWV3 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC19.58■□□□□ 0.73
RTN4IP1Q8WWV3 AC093536.1-201ENST00000569153 554 ntBASIC19.58■□□□□ 0.72
RTN4IP1Q8WWV3 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.58■□□□□ 0.72
RTN4IP1Q8WWV3 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19.58■□□□□ 0.72
RTN4IP1Q8WWV3 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RTN4IP1Q8WWV3 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RTN4IP1Q8WWV3 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RTN4IP1Q8WWV3 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC19.57■□□□□ 0.72
RTN4IP1Q8WWV3 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
RTN4IP1Q8WWV3 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RTN4IP1Q8WWV3 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
RTN4IP1Q8WWV3 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RTN4IP1Q8WWV3 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC19.57■□□□□ 0.72
RTN4IP1Q8WWV3 HSD17B1P1-201ENST00000590052 955 ntBASIC19.57■□□□□ 0.72
RTN4IP1Q8WWV3 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RTN4IP1Q8WWV3 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
RTN4IP1Q8WWV3 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.57■□□□□ 0.72
RTN4IP1Q8WWV3 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
RTN4IP1Q8WWV3 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
RTN4IP1Q8WWV3 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RTN4IP1Q8WWV3 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RTN4IP1Q8WWV3 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RTN4IP1Q8WWV3 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.56■□□□□ 0.72
RTN4IP1Q8WWV3 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RTN4IP1Q8WWV3 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
RTN4IP1Q8WWV3 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RTN4IP1Q8WWV3 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RTN4IP1Q8WWV3 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RTN4IP1Q8WWV3 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RTN4IP1Q8WWV3 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RTN4IP1Q8WWV3 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RTN4IP1Q8WWV3 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RTN4IP1Q8WWV3 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.55■□□□□ 0.72
RTN4IP1Q8WWV3 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RTN4IP1Q8WWV3 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms