Protein–RNA interactions for Protein: Q8TEB7

RNF128, E3 ubiquitin-protein ligase RNF128, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF128Q8TEB7 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF128Q8TEB7 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF128Q8TEB7 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.19■□□□□ 0.98
RNF128Q8TEB7 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF128Q8TEB7 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
RNF128Q8TEB7 YBX1P4-201ENST00000392794 808 ntBASIC21.18■□□□□ 0.98
RNF128Q8TEB7 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.18■□□□□ 0.98
RNF128Q8TEB7 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
RNF128Q8TEB7 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF128Q8TEB7 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.17■□□□□ 0.98
RNF128Q8TEB7 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.17■□□□□ 0.98
RNF128Q8TEB7 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
RNF128Q8TEB7 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.17■□□□□ 0.98
RNF128Q8TEB7 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.17■□□□□ 0.98
RNF128Q8TEB7 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.17■□□□□ 0.98
RNF128Q8TEB7 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF128Q8TEB7 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF128Q8TEB7 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.17■□□□□ 0.98
RNF128Q8TEB7 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF128Q8TEB7 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF128Q8TEB7 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF128Q8TEB7 AC022211.4-201ENST00000625094 2161 ntBASIC21.16■□□□□ 0.98
RNF128Q8TEB7 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RNF128Q8TEB7 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.16■□□□□ 0.98
RNF128Q8TEB7 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.16■□□□□ 0.98
RNF128Q8TEB7 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
RNF128Q8TEB7 AC022616.5-201ENST00000518796 181 ntBASIC21.16■□□□□ 0.98
RNF128Q8TEB7 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF128Q8TEB7 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.16■□□□□ 0.98
RNF128Q8TEB7 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.16■□□□□ 0.98
RNF128Q8TEB7 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
RNF128Q8TEB7 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF128Q8TEB7 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF128Q8TEB7 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RNF128Q8TEB7 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF128Q8TEB7 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF128Q8TEB7 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RNF128Q8TEB7 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RNF128Q8TEB7 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF128Q8TEB7 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RNF128Q8TEB7 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF128Q8TEB7 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF128Q8TEB7 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
RNF128Q8TEB7 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
RNF128Q8TEB7 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.14■□□□□ 0.98
RNF128Q8TEB7 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RNF128Q8TEB7 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RNF128Q8TEB7 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RNF128Q8TEB7 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RNF128Q8TEB7 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RNF128Q8TEB7 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF128Q8TEB7 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF128Q8TEB7 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RNF128Q8TEB7 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF128Q8TEB7 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.13■□□□□ 0.97
RNF128Q8TEB7 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF128Q8TEB7 AL592295.1-201ENST00000400984 884 ntBASIC21.12■□□□□ 0.97
RNF128Q8TEB7 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.12■□□□□ 0.97
RNF128Q8TEB7 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.12■□□□□ 0.97
RNF128Q8TEB7 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.12■□□□□ 0.97
RNF128Q8TEB7 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF128Q8TEB7 AC138932.3-201ENST00000567634 1902 ntBASIC21.12■□□□□ 0.97
RNF128Q8TEB7 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
RNF128Q8TEB7 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RNF128Q8TEB7 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF128Q8TEB7 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RNF128Q8TEB7 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF128Q8TEB7 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF128Q8TEB7 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.11■□□□□ 0.97
RNF128Q8TEB7 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF128Q8TEB7 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RNF128Q8TEB7 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF128Q8TEB7 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RNF128Q8TEB7 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF128Q8TEB7 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RNF128Q8TEB7 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.1■□□□□ 0.97
RNF128Q8TEB7 AC103724.3-201ENST00000564481 992 ntBASIC21.1■□□□□ 0.97
RNF128Q8TEB7 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.1■□□□□ 0.97
RNF128Q8TEB7 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF128Q8TEB7 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.1■□□□□ 0.97
RNF128Q8TEB7 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF128Q8TEB7 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF128Q8TEB7 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF128Q8TEB7 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF128Q8TEB7 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
RNF128Q8TEB7 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.09■□□□□ 0.97
RNF128Q8TEB7 FOXO3B-201ENST00000395675 1928 ntBASIC21.09■□□□□ 0.97
RNF128Q8TEB7 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF128Q8TEB7 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF128Q8TEB7 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF128Q8TEB7 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.09■□□□□ 0.97
RNF128Q8TEB7 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RNF128Q8TEB7 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
RNF128Q8TEB7 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.08■□□□□ 0.97
RNF128Q8TEB7 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.08■□□□□ 0.97
RNF128Q8TEB7 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
RNF128Q8TEB7 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.08■□□□□ 0.96
RNF128Q8TEB7 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
RNF128Q8TEB7 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RNF128Q8TEB7 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms