Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RPS4Y2Q8TD47 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.58■□□□□ 0.89
RPS4Y2Q8TD47 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
RPS4Y2Q8TD47 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
RPS4Y2Q8TD47 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.58■□□□□ 0.88
RPS4Y2Q8TD47 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RPS4Y2Q8TD47 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RPS4Y2Q8TD47 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RPS4Y2Q8TD47 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.57■□□□□ 0.88
RPS4Y2Q8TD47 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RPS4Y2Q8TD47 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RPS4Y2Q8TD47 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
RPS4Y2Q8TD47 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RPS4Y2Q8TD47 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RPS4Y2Q8TD47 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RPS4Y2Q8TD47 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RPS4Y2Q8TD47 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RPS4Y2Q8TD47 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RPS4Y2Q8TD47 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.56■□□□□ 0.88
RPS4Y2Q8TD47 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.56■□□□□ 0.88
RPS4Y2Q8TD47 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RPS4Y2Q8TD47 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.56■□□□□ 0.88
RPS4Y2Q8TD47 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RPS4Y2Q8TD47 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RPS4Y2Q8TD47 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RPS4Y2Q8TD47 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.55■□□□□ 0.88
RPS4Y2Q8TD47 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
RPS4Y2Q8TD47 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
RPS4Y2Q8TD47 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
RPS4Y2Q8TD47 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RPS4Y2Q8TD47 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RPS4Y2Q8TD47 ABCB10P4-201ENST00000566803 2184 ntBASIC20.54■□□□□ 0.88
RPS4Y2Q8TD47 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RPS4Y2Q8TD47 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
RPS4Y2Q8TD47 MIR4449-201ENST00000578365 66 ntBASIC20.54■□□□□ 0.88
RPS4Y2Q8TD47 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.54■□□□□ 0.88
RPS4Y2Q8TD47 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RPS4Y2Q8TD47 AC060814.1-201ENST00000554326 538 ntBASIC20.53■□□□□ 0.88
RPS4Y2Q8TD47 METRNL-202ENST00000570778 967 ntTSL 5 BASIC20.53■□□□□ 0.88
RPS4Y2Q8TD47 HLA-L-211ENST00000482052 1765 ntBASIC20.53■□□□□ 0.88
RPS4Y2Q8TD47 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RPS4Y2Q8TD47 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RPS4Y2Q8TD47 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
RPS4Y2Q8TD47 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RPS4Y2Q8TD47 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RPS4Y2Q8TD47 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RPS4Y2Q8TD47 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RPS4Y2Q8TD47 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.52■□□□□ 0.88
RPS4Y2Q8TD47 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RPS4Y2Q8TD47 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RPS4Y2Q8TD47 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
RPS4Y2Q8TD47 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.52■□□□□ 0.88
RPS4Y2Q8TD47 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
RPS4Y2Q8TD47 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RPS4Y2Q8TD47 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RPS4Y2Q8TD47 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RPS4Y2Q8TD47 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RPS4Y2Q8TD47 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RPS4Y2Q8TD47 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
RPS4Y2Q8TD47 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.51■□□□□ 0.87
RPS4Y2Q8TD47 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
RPS4Y2Q8TD47 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.51■□□□□ 0.87
RPS4Y2Q8TD47 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
RPS4Y2Q8TD47 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
RPS4Y2Q8TD47 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RPS4Y2Q8TD47 AC092296.2-201ENST00000589470 999 ntBASIC20.5■□□□□ 0.87
RPS4Y2Q8TD47 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
RPS4Y2Q8TD47 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.5■□□□□ 0.87
RPS4Y2Q8TD47 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.5■□□□□ 0.87
RPS4Y2Q8TD47 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RPS4Y2Q8TD47 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
RPS4Y2Q8TD47 SMPD5-203ENST00000639008 1464 ntBASIC20.5■□□□□ 0.87
RPS4Y2Q8TD47 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
RPS4Y2Q8TD47 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
RPS4Y2Q8TD47 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RPS4Y2Q8TD47 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
RPS4Y2Q8TD47 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RPS4Y2Q8TD47 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.49■□□□□ 0.87
RPS4Y2Q8TD47 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RPS4Y2Q8TD47 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.49■□□□□ 0.87
RPS4Y2Q8TD47 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.49■□□□□ 0.87
RPS4Y2Q8TD47 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
RPS4Y2Q8TD47 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
RPS4Y2Q8TD47 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RPS4Y2Q8TD47 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
RPS4Y2Q8TD47 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RPS4Y2Q8TD47 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RPS4Y2Q8TD47 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RPS4Y2Q8TD47 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.48■□□□□ 0.87
RPS4Y2Q8TD47 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RPS4Y2Q8TD47 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RPS4Y2Q8TD47 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RPS4Y2Q8TD47 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RPS4Y2Q8TD47 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RPS4Y2Q8TD47 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RPS4Y2Q8TD47 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.47■□□□□ 0.87
RPS4Y2Q8TD47 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RPS4Y2Q8TD47 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RPS4Y2Q8TD47 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RPS4Y2Q8TD47 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms