Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SPTSSBQ8NFR3 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC12.98□□□□□ -0.33
SPTSSBQ8NFR3 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
SPTSSBQ8NFR3 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC12.98□□□□□ -0.33
SPTSSBQ8NFR3 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
SPTSSBQ8NFR3 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SPTSSBQ8NFR3 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC12.98□□□□□ -0.33
SPTSSBQ8NFR3 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SPTSSBQ8NFR3 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SPTSSBQ8NFR3 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
SPTSSBQ8NFR3 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC12.98□□□□□ -0.33
SPTSSBQ8NFR3 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SPTSSBQ8NFR3 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SPTSSBQ8NFR3 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SPTSSBQ8NFR3 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SPTSSBQ8NFR3 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
SPTSSBQ8NFR3 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
SPTSSBQ8NFR3 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SPTSSBQ8NFR3 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC12.97□□□□□ -0.33
SPTSSBQ8NFR3 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
SPTSSBQ8NFR3 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SPTSSBQ8NFR3 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SPTSSBQ8NFR3 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SPTSSBQ8NFR3 CASK-201ENST00000378154 2494 ntTSL 5 BASIC12.97□□□□□ -0.33
SPTSSBQ8NFR3 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
SPTSSBQ8NFR3 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
SPTSSBQ8NFR3 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SPTSSBQ8NFR3 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
SPTSSBQ8NFR3 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC12.96□□□□□ -0.33
SPTSSBQ8NFR3 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
SPTSSBQ8NFR3 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SPTSSBQ8NFR3 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
SPTSSBQ8NFR3 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
SPTSSBQ8NFR3 PROC-203ENST00000409048 1586 ntTSL 5 BASIC12.96□□□□□ -0.33
SPTSSBQ8NFR3 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
SPTSSBQ8NFR3 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SPTSSBQ8NFR3 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
SPTSSBQ8NFR3 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
SPTSSBQ8NFR3 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC12.96□□□□□ -0.34
SPTSSBQ8NFR3 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
SPTSSBQ8NFR3 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC12.96□□□□□ -0.34
SPTSSBQ8NFR3 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
SPTSSBQ8NFR3 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
SPTSSBQ8NFR3 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SPTSSBQ8NFR3 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SPTSSBQ8NFR3 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SPTSSBQ8NFR3 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC12.95□□□□□ -0.34
SPTSSBQ8NFR3 EFS-203ENST00000429593 2610 ntTSL 2 BASIC12.95□□□□□ -0.34
SPTSSBQ8NFR3 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SPTSSBQ8NFR3 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SPTSSBQ8NFR3 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SPTSSBQ8NFR3 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SPTSSBQ8NFR3 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SPTSSBQ8NFR3 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SPTSSBQ8NFR3 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
SPTSSBQ8NFR3 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
SPTSSBQ8NFR3 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SPTSSBQ8NFR3 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
SPTSSBQ8NFR3 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SPTSSBQ8NFR3 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SPTSSBQ8NFR3 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SPTSSBQ8NFR3 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SPTSSBQ8NFR3 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SPTSSBQ8NFR3 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SPTSSBQ8NFR3 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
SPTSSBQ8NFR3 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SPTSSBQ8NFR3 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SPTSSBQ8NFR3 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
SPTSSBQ8NFR3 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC12.93□□□□□ -0.34
SPTSSBQ8NFR3 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC12.93□□□□□ -0.34
SPTSSBQ8NFR3 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC12.93□□□□□ -0.34
SPTSSBQ8NFR3 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SPTSSBQ8NFR3 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
SPTSSBQ8NFR3 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SPTSSBQ8NFR3 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
SPTSSBQ8NFR3 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
SPTSSBQ8NFR3 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC12.92□□□□□ -0.34
SPTSSBQ8NFR3 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
SPTSSBQ8NFR3 BCL2-203ENST00000589955 5011 ntBASIC12.92□□□□□ -0.34
SPTSSBQ8NFR3 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
SPTSSBQ8NFR3 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
SPTSSBQ8NFR3 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
SPTSSBQ8NFR3 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SPTSSBQ8NFR3 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
SPTSSBQ8NFR3 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SPTSSBQ8NFR3 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
SPTSSBQ8NFR3 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SPTSSBQ8NFR3 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
SPTSSBQ8NFR3 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SPTSSBQ8NFR3 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SPTSSBQ8NFR3 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SPTSSBQ8NFR3 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SPTSSBQ8NFR3 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
SPTSSBQ8NFR3 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SPTSSBQ8NFR3 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SPTSSBQ8NFR3 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SPTSSBQ8NFR3 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SPTSSBQ8NFR3 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SPTSSBQ8NFR3 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SPTSSBQ8NFR3 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms