Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
RTL9Q8NET4 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC29.22■■■□□ 2.27
RTL9Q8NET4 AL121749.1-202ENST00000609313 2153 ntBASIC29.22■■■□□ 2.27
RTL9Q8NET4 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC29.22■■■□□ 2.27
RTL9Q8NET4 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC29.21■■■□□ 2.27
RTL9Q8NET4 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC29.21■■■□□ 2.27
RTL9Q8NET4 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC29.21■■■□□ 2.27
RTL9Q8NET4 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
RTL9Q8NET4 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC29.2■■■□□ 2.27
RTL9Q8NET4 AC090877.2-201ENST00000558441 1738 ntBASIC29.2■■■□□ 2.27
RTL9Q8NET4 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC29.2■■■□□ 2.27
RTL9Q8NET4 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC29.2■■■□□ 2.27
RTL9Q8NET4 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC29.2■■■□□ 2.26
RTL9Q8NET4 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
RTL9Q8NET4 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
RTL9Q8NET4 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
RTL9Q8NET4 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC29.19■■■□□ 2.26
RTL9Q8NET4 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC29.19■■■□□ 2.26
RTL9Q8NET4 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
RTL9Q8NET4 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
RTL9Q8NET4 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
RTL9Q8NET4 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
RTL9Q8NET4 AC131281.2-201ENST00000520478 145 ntBASIC29.18■■■□□ 2.26
RTL9Q8NET4 AC010997.5-201ENST00000609182 354 ntBASIC29.18■■■□□ 2.26
RTL9Q8NET4 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC29.18■■■□□ 2.26
RTL9Q8NET4 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
RTL9Q8NET4 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
RTL9Q8NET4 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
RTL9Q8NET4 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC29.17■■■□□ 2.26
RTL9Q8NET4 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC29.17■■■□□ 2.26
RTL9Q8NET4 LSM4-201ENST00000252816 986 ntTSL 2 BASIC29.17■■■□□ 2.26
RTL9Q8NET4 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC29.17■■■□□ 2.26
RTL9Q8NET4 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
RTL9Q8NET4 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
RTL9Q8NET4 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
RTL9Q8NET4 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
RTL9Q8NET4 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC29.16■■■□□ 2.26
RTL9Q8NET4 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC29.16■■■□□ 2.26
RTL9Q8NET4 AC092803.2-201ENST00000564287 1899 ntBASIC29.16■■■□□ 2.26
RTL9Q8NET4 TRIR-202ENST00000588213 841 ntTSL 3 BASIC29.16■■■□□ 2.26
RTL9Q8NET4 MTDHP2-201ENST00000601468 714 ntBASIC29.16■■■□□ 2.26
RTL9Q8NET4 MIR6724-1-201ENST00000616420 92 ntBASIC29.16■■■□□ 2.26
RTL9Q8NET4 MIR6724-2-201ENST00000616483 92 ntBASIC29.16■■■□□ 2.26
RTL9Q8NET4 MIR6724-4-201ENST00000617390 92 ntBASIC29.16■■■□□ 2.26
RTL9Q8NET4 MIR6724-3-201ENST00000622482 92 ntBASIC29.16■■■□□ 2.26
RTL9Q8NET4 AL117332.1-201ENST00000622628 974 ntBASIC29.16■■■□□ 2.26
RTL9Q8NET4 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC29.16■■■□□ 2.26
RTL9Q8NET4 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
RTL9Q8NET4 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
RTL9Q8NET4 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC29.16■■■□□ 2.26
RTL9Q8NET4 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC29.15■■■□□ 2.26
RTL9Q8NET4 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
RTL9Q8NET4 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
RTL9Q8NET4 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
RTL9Q8NET4 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC29.14■■■□□ 2.26
RTL9Q8NET4 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC29.14■■■□□ 2.25
RTL9Q8NET4 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC29.13■■■□□ 2.25
RTL9Q8NET4 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC29.13■■■□□ 2.25
RTL9Q8NET4 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC29.13■■■□□ 2.25
RTL9Q8NET4 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC29.13■■■□□ 2.25
RTL9Q8NET4 EXOG-217ENST00000630638 197 ntTSL 5 BASIC29.13■■■□□ 2.25
RTL9Q8NET4 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC29.13■■■□□ 2.25
RTL9Q8NET4 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC29.13■■■□□ 2.25
RTL9Q8NET4 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC29.13■■■□□ 2.25
RTL9Q8NET4 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
RTL9Q8NET4 MIR3621-201ENST00000580529 85 ntBASIC29.13■■■□□ 2.25
RTL9Q8NET4 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
RTL9Q8NET4 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC29.12■■■□□ 2.25
RTL9Q8NET4 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC29.12■■■□□ 2.25
RTL9Q8NET4 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC29.12■■■□□ 2.25
RTL9Q8NET4 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
RTL9Q8NET4 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
RTL9Q8NET4 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
RTL9Q8NET4 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
RTL9Q8NET4 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC29.11■■■□□ 2.25
RTL9Q8NET4 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC29.11■■■□□ 2.25
RTL9Q8NET4 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC29.11■■■□□ 2.25
RTL9Q8NET4 CLTA-210ENST00000540080 989 ntTSL 2 BASIC29.11■■■□□ 2.25
RTL9Q8NET4 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC29.11■■■□□ 2.25
RTL9Q8NET4 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
RTL9Q8NET4 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC29.1■■■□□ 2.25
RTL9Q8NET4 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
RTL9Q8NET4 SNX5-217ENST00000606557 1087 ntBASIC29.1■■■□□ 2.25
RTL9Q8NET4 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC29.09■■■□□ 2.25
RTL9Q8NET4 RPP21-222ENST00000433076 577 ntTSL 2 BASIC29.09■■■□□ 2.25
RTL9Q8NET4 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC29.09■■■□□ 2.25
RTL9Q8NET4 AL139246.5-201ENST00000606645 996 ntBASIC29.09■■■□□ 2.25
RTL9Q8NET4 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC29.09■■■□□ 2.25
RTL9Q8NET4 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC29.09■■■□□ 2.25
RTL9Q8NET4 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC29.08■■■□□ 2.25
RTL9Q8NET4 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
RTL9Q8NET4 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC29.08■■■□□ 2.25
RTL9Q8NET4 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC29.08■■■□□ 2.25
RTL9Q8NET4 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC29.08■■■□□ 2.25
RTL9Q8NET4 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
RTL9Q8NET4 RALB-208ENST00000631312 311 ntTSL 5 BASIC29.07■■■□□ 2.24
RTL9Q8NET4 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
RTL9Q8NET4 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC29.07■■■□□ 2.24
RTL9Q8NET4 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC29.07■■■□□ 2.24
RTL9Q8NET4 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC29.06■■■□□ 2.24
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms