Protein–RNA interactions for Protein: Q8NDX1

PSD4, PH and SEC7 domain-containing protein 4, humanhuman

Predictions only

Length 1,056 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSD4Q8NDX1 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.96■■□□□ 1.11
PSD4Q8NDX1 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC21.96■■□□□ 1.11
PSD4Q8NDX1 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.96■■□□□ 1.11
PSD4Q8NDX1 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
PSD4Q8NDX1 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.96■■□□□ 1.11
PSD4Q8NDX1 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PSD4Q8NDX1 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.95■■□□□ 1.1
PSD4Q8NDX1 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PSD4Q8NDX1 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PSD4Q8NDX1 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.95■■□□□ 1.1
PSD4Q8NDX1 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.95■■□□□ 1.1
PSD4Q8NDX1 AL451085.2-201ENST00000605085 799 ntBASIC21.95■■□□□ 1.1
PSD4Q8NDX1 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PSD4Q8NDX1 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.94■■□□□ 1.1
PSD4Q8NDX1 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
PSD4Q8NDX1 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PSD4Q8NDX1 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
PSD4Q8NDX1 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
PSD4Q8NDX1 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PSD4Q8NDX1 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
PSD4Q8NDX1 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.93■■□□□ 1.1
PSD4Q8NDX1 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.93■■□□□ 1.1
PSD4Q8NDX1 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.93■■□□□ 1.1
PSD4Q8NDX1 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
PSD4Q8NDX1 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PSD4Q8NDX1 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PSD4Q8NDX1 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
PSD4Q8NDX1 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.93■■□□□ 1.1
PSD4Q8NDX1 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.92■■□□□ 1.1
PSD4Q8NDX1 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PSD4Q8NDX1 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PSD4Q8NDX1 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PSD4Q8NDX1 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
PSD4Q8NDX1 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
PSD4Q8NDX1 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
PSD4Q8NDX1 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
PSD4Q8NDX1 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.91■■□□□ 1.1
PSD4Q8NDX1 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PSD4Q8NDX1 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PSD4Q8NDX1 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
PSD4Q8NDX1 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PSD4Q8NDX1 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PSD4Q8NDX1 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PSD4Q8NDX1 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.91■■□□□ 1.1
PSD4Q8NDX1 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PSD4Q8NDX1 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
PSD4Q8NDX1 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PSD4Q8NDX1 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.9■■□□□ 1.1
PSD4Q8NDX1 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
PSD4Q8NDX1 AL035685.1-201ENST00000636663 812 ntBASIC21.9■■□□□ 1.1
PSD4Q8NDX1 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PSD4Q8NDX1 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC21.89■■□□□ 1.1
PSD4Q8NDX1 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.89■■□□□ 1.1
PSD4Q8NDX1 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
PSD4Q8NDX1 AC103724.3-201ENST00000564481 992 ntBASIC21.89■■□□□ 1.09
PSD4Q8NDX1 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PSD4Q8NDX1 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PSD4Q8NDX1 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.88■■□□□ 1.09
PSD4Q8NDX1 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
PSD4Q8NDX1 ERN1-208ENST00000606895 2068 ntBASIC21.87■■□□□ 1.09
PSD4Q8NDX1 AC133561.1-201ENST00000568600 2415 ntBASIC21.87■■□□□ 1.09
PSD4Q8NDX1 AC010501.1-201ENST00000606270 1962 ntBASIC21.87■■□□□ 1.09
PSD4Q8NDX1 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PSD4Q8NDX1 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PSD4Q8NDX1 AL031848.2-201ENST00000607670 837 ntBASIC21.87■■□□□ 1.09
PSD4Q8NDX1 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PSD4Q8NDX1 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PSD4Q8NDX1 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
PSD4Q8NDX1 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
PSD4Q8NDX1 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
PSD4Q8NDX1 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
PSD4Q8NDX1 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.87■■□□□ 1.09
PSD4Q8NDX1 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
PSD4Q8NDX1 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
PSD4Q8NDX1 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
PSD4Q8NDX1 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
PSD4Q8NDX1 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PSD4Q8NDX1 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PSD4Q8NDX1 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.86■■□□□ 1.09
PSD4Q8NDX1 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
PSD4Q8NDX1 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PSD4Q8NDX1 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PSD4Q8NDX1 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PSD4Q8NDX1 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PSD4Q8NDX1 AC009299.2-201ENST00000482477 511 ntBASIC21.85■■□□□ 1.09
PSD4Q8NDX1 AC022616.5-201ENST00000518796 181 ntBASIC21.85■■□□□ 1.09
PSD4Q8NDX1 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.85■■□□□ 1.09
PSD4Q8NDX1 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PSD4Q8NDX1 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.85■■□□□ 1.09
PSD4Q8NDX1 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.85■■□□□ 1.09
PSD4Q8NDX1 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.85■■□□□ 1.09
PSD4Q8NDX1 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PSD4Q8NDX1 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
PSD4Q8NDX1 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
PSD4Q8NDX1 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PSD4Q8NDX1 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
PSD4Q8NDX1 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
PSD4Q8NDX1 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PSD4Q8NDX1 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
PSD4Q8NDX1 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms