Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC21.36■■□□□ 1.01
CLDN22Q8N7P3 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC21.36■■□□□ 1.01
CLDN22Q8N7P3 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.36■■□□□ 1.01
CLDN22Q8N7P3 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
CLDN22Q8N7P3 AC068473.5-201ENST00000616428 2072 ntBASIC21.36■■□□□ 1.01
CLDN22Q8N7P3 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CLDN22Q8N7P3 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CLDN22Q8N7P3 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CLDN22Q8N7P3 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CLDN22Q8N7P3 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
CLDN22Q8N7P3 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CLDN22Q8N7P3 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
CLDN22Q8N7P3 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CLDN22Q8N7P3 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CLDN22Q8N7P3 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CLDN22Q8N7P3 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CLDN22Q8N7P3 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
CLDN22Q8N7P3 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CLDN22Q8N7P3 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC21.34■■□□□ 1.01
CLDN22Q8N7P3 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CLDN22Q8N7P3 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CLDN22Q8N7P3 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CLDN22Q8N7P3 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CLDN22Q8N7P3 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.33■■□□□ 1.01
CLDN22Q8N7P3 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CLDN22Q8N7P3 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CLDN22Q8N7P3 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
CLDN22Q8N7P3 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CLDN22Q8N7P3 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CLDN22Q8N7P3 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CLDN22Q8N7P3 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CLDN22Q8N7P3 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CLDN22Q8N7P3 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.33■■□□□ 1
CLDN22Q8N7P3 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.33■■□□□ 1
CLDN22Q8N7P3 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.32■■□□□ 1
CLDN22Q8N7P3 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CLDN22Q8N7P3 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC21.32■■□□□ 1
CLDN22Q8N7P3 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC21.32■■□□□ 1
CLDN22Q8N7P3 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.32■■□□□ 1
CLDN22Q8N7P3 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
CLDN22Q8N7P3 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CLDN22Q8N7P3 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CLDN22Q8N7P3 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CLDN22Q8N7P3 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CLDN22Q8N7P3 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CLDN22Q8N7P3 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
CLDN22Q8N7P3 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CLDN22Q8N7P3 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CLDN22Q8N7P3 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
CLDN22Q8N7P3 RP9P-202ENST00000450133 1212 ntBASIC21.31■■□□□ 1
CLDN22Q8N7P3 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
CLDN22Q8N7P3 AC093536.1-201ENST00000569153 554 ntBASIC21.31■■□□□ 1
CLDN22Q8N7P3 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.31■■□□□ 1
CLDN22Q8N7P3 AC079834.2-201ENST00000609776 1949 ntBASIC21.31■■□□□ 1
CLDN22Q8N7P3 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.31■■□□□ 1
CLDN22Q8N7P3 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
CLDN22Q8N7P3 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.3■■□□□ 1
CLDN22Q8N7P3 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
CLDN22Q8N7P3 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.3■■□□□ 1
CLDN22Q8N7P3 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CLDN22Q8N7P3 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.3■■□□□ 1
CLDN22Q8N7P3 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.3■■□□□ 1
CLDN22Q8N7P3 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC21.29■■□□□ 1
CLDN22Q8N7P3 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CLDN22Q8N7P3 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
CLDN22Q8N7P3 AC007029.1-201ENST00000604183 313 ntBASIC21.29■■□□□ 1
CLDN22Q8N7P3 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.29■■□□□ 1
CLDN22Q8N7P3 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CLDN22Q8N7P3 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CLDN22Q8N7P3 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC21.29■■□□□ 1
CLDN22Q8N7P3 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
CLDN22Q8N7P3 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.28■■□□□ 1
CLDN22Q8N7P3 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21.28■■□□□ 1
CLDN22Q8N7P3 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC21.28■■□□□ 1
CLDN22Q8N7P3 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.28■■□□□ 1
CLDN22Q8N7P3 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.28■■□□□ 1
CLDN22Q8N7P3 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.28■■□□□ 1
CLDN22Q8N7P3 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC21.27■■□□□ 1
CLDN22Q8N7P3 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.27■■□□□ 1
CLDN22Q8N7P3 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.27■■□□□ 1
CLDN22Q8N7P3 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.27■■□□□ 1
CLDN22Q8N7P3 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.27■■□□□ 1
CLDN22Q8N7P3 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CLDN22Q8N7P3 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CLDN22Q8N7P3 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC21.27■■□□□ 1
CLDN22Q8N7P3 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC21.27■■□□□ 1
CLDN22Q8N7P3 ABHD17AP3-201ENST00000503096 1137 ntBASIC21.27■■□□□ 1
CLDN22Q8N7P3 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CLDN22Q8N7P3 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CLDN22Q8N7P3 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.27■□□□□ 0.99
CLDN22Q8N7P3 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLDN22Q8N7P3 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLDN22Q8N7P3 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
CLDN22Q8N7P3 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
CLDN22Q8N7P3 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLDN22Q8N7P3 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.26■□□□□ 0.99
CLDN22Q8N7P3 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLDN22Q8N7P3 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLDN22Q8N7P3 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLDN22Q8N7P3 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms