Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CROCCP3Q8IVE0 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.21■□□□□ 0.99
CROCCP3Q8IVE0 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CROCCP3Q8IVE0 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CROCCP3Q8IVE0 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CROCCP3Q8IVE0 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CROCCP3Q8IVE0 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.2■□□□□ 0.98
CROCCP3Q8IVE0 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CROCCP3Q8IVE0 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CROCCP3Q8IVE0 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.2■□□□□ 0.98
CROCCP3Q8IVE0 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CROCCP3Q8IVE0 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CROCCP3Q8IVE0 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CROCCP3Q8IVE0 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.2■□□□□ 0.98
CROCCP3Q8IVE0 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CROCCP3Q8IVE0 AC007375.3-201ENST00000600936 2314 ntBASIC21.2■□□□□ 0.98
CROCCP3Q8IVE0 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.19■□□□□ 0.98
CROCCP3Q8IVE0 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CROCCP3Q8IVE0 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CROCCP3Q8IVE0 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CROCCP3Q8IVE0 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CROCCP3Q8IVE0 AC108673.1-201ENST00000510422 1159 ntBASIC21.19■□□□□ 0.98
CROCCP3Q8IVE0 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC21.19■□□□□ 0.98
CROCCP3Q8IVE0 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CROCCP3Q8IVE0 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CROCCP3Q8IVE0 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
CROCCP3Q8IVE0 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CROCCP3Q8IVE0 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.18■□□□□ 0.98
CROCCP3Q8IVE0 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CROCCP3Q8IVE0 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CROCCP3Q8IVE0 CAHM-201ENST00000604200 896 ntBASIC21.17■□□□□ 0.98
CROCCP3Q8IVE0 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CROCCP3Q8IVE0 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CROCCP3Q8IVE0 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC21.17■□□□□ 0.98
CROCCP3Q8IVE0 LINC00526-201ENST00000581067 1875 ntBASIC21.17■□□□□ 0.98
CROCCP3Q8IVE0 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CROCCP3Q8IVE0 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CROCCP3Q8IVE0 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CROCCP3Q8IVE0 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.16■□□□□ 0.98
CROCCP3Q8IVE0 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CROCCP3Q8IVE0 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.16■□□□□ 0.98
CROCCP3Q8IVE0 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CROCCP3Q8IVE0 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CROCCP3Q8IVE0 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.15■□□□□ 0.98
CROCCP3Q8IVE0 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CROCCP3Q8IVE0 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CROCCP3Q8IVE0 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.15■□□□□ 0.98
CROCCP3Q8IVE0 MIR762-201ENST00000390236 83 ntBASIC21.15■□□□□ 0.98
CROCCP3Q8IVE0 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.15■□□□□ 0.98
CROCCP3Q8IVE0 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CROCCP3Q8IVE0 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CROCCP3Q8IVE0 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CROCCP3Q8IVE0 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC21.14■□□□□ 0.98
CROCCP3Q8IVE0 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC21.14■□□□□ 0.98
CROCCP3Q8IVE0 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CROCCP3Q8IVE0 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CROCCP3Q8IVE0 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC21.14■□□□□ 0.97
CROCCP3Q8IVE0 DUSP8P3-201ENST00000399571 1760 ntBASIC21.14■□□□□ 0.97
CROCCP3Q8IVE0 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.14■□□□□ 0.97
CROCCP3Q8IVE0 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CROCCP3Q8IVE0 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CROCCP3Q8IVE0 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CROCCP3Q8IVE0 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CROCCP3Q8IVE0 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
CROCCP3Q8IVE0 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CROCCP3Q8IVE0 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CROCCP3Q8IVE0 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
CROCCP3Q8IVE0 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CROCCP3Q8IVE0 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
CROCCP3Q8IVE0 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CROCCP3Q8IVE0 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.12■□□□□ 0.97
CROCCP3Q8IVE0 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
CROCCP3Q8IVE0 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
CROCCP3Q8IVE0 CHML-205ENST00000638160 705 ntTSL 3 BASIC21.12■□□□□ 0.97
CROCCP3Q8IVE0 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CROCCP3Q8IVE0 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CROCCP3Q8IVE0 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CROCCP3Q8IVE0 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CROCCP3Q8IVE0 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.12■□□□□ 0.97
CROCCP3Q8IVE0 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
CROCCP3Q8IVE0 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CROCCP3Q8IVE0 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CROCCP3Q8IVE0 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
CROCCP3Q8IVE0 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CROCCP3Q8IVE0 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CROCCP3Q8IVE0 FOXO3B-201ENST00000395675 1928 ntBASIC21.11■□□□□ 0.97
CROCCP3Q8IVE0 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CROCCP3Q8IVE0 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CROCCP3Q8IVE0 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CROCCP3Q8IVE0 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.1■□□□□ 0.97
CROCCP3Q8IVE0 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CROCCP3Q8IVE0 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CROCCP3Q8IVE0 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CROCCP3Q8IVE0 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
CROCCP3Q8IVE0 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC21.1■□□□□ 0.97
CROCCP3Q8IVE0 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.1■□□□□ 0.97
CROCCP3Q8IVE0 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.1■□□□□ 0.97
CROCCP3Q8IVE0 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
CROCCP3Q8IVE0 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CROCCP3Q8IVE0 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms