Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CRLF3Q8IUI8 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CRLF3Q8IUI8 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC23.3■■□□□ 1.32
CRLF3Q8IUI8 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
CRLF3Q8IUI8 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CRLF3Q8IUI8 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC23.3■■□□□ 1.32
CRLF3Q8IUI8 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CRLF3Q8IUI8 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CRLF3Q8IUI8 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC23.29■■□□□ 1.32
CRLF3Q8IUI8 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CRLF3Q8IUI8 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC23.29■■□□□ 1.32
CRLF3Q8IUI8 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
CRLF3Q8IUI8 AC060814.1-201ENST00000554326 538 ntBASIC23.29■■□□□ 1.32
CRLF3Q8IUI8 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
CRLF3Q8IUI8 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
CRLF3Q8IUI8 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CRLF3Q8IUI8 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CRLF3Q8IUI8 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC23.28■■□□□ 1.32
CRLF3Q8IUI8 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC23.28■■□□□ 1.32
CRLF3Q8IUI8 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CRLF3Q8IUI8 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CRLF3Q8IUI8 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CRLF3Q8IUI8 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CRLF3Q8IUI8 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
CRLF3Q8IUI8 HES4-202ENST00000428771 1040 ntTSL 2 BASIC23.27■■□□□ 1.32
CRLF3Q8IUI8 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC23.27■■□□□ 1.32
CRLF3Q8IUI8 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC23.27■■□□□ 1.32
CRLF3Q8IUI8 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CRLF3Q8IUI8 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC23.27■■□□□ 1.32
CRLF3Q8IUI8 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CRLF3Q8IUI8 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC23.27■■□□□ 1.32
CRLF3Q8IUI8 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CRLF3Q8IUI8 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CRLF3Q8IUI8 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CRLF3Q8IUI8 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC23.26■■□□□ 1.31
CRLF3Q8IUI8 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CRLF3Q8IUI8 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CRLF3Q8IUI8 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
CRLF3Q8IUI8 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CRLF3Q8IUI8 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CRLF3Q8IUI8 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
CRLF3Q8IUI8 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
CRLF3Q8IUI8 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CRLF3Q8IUI8 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CRLF3Q8IUI8 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CRLF3Q8IUI8 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CRLF3Q8IUI8 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC23.25■■□□□ 1.31
CRLF3Q8IUI8 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CRLF3Q8IUI8 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CRLF3Q8IUI8 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
CRLF3Q8IUI8 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CRLF3Q8IUI8 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
CRLF3Q8IUI8 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CRLF3Q8IUI8 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC23.24■■□□□ 1.31
CRLF3Q8IUI8 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC23.24■■□□□ 1.31
CRLF3Q8IUI8 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC23.24■■□□□ 1.31
CRLF3Q8IUI8 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CRLF3Q8IUI8 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
CRLF3Q8IUI8 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC23.24■■□□□ 1.31
CRLF3Q8IUI8 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CRLF3Q8IUI8 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC23.24■■□□□ 1.31
CRLF3Q8IUI8 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
CRLF3Q8IUI8 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
CRLF3Q8IUI8 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CRLF3Q8IUI8 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CRLF3Q8IUI8 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CRLF3Q8IUI8 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CRLF3Q8IUI8 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC23.23■■□□□ 1.31
CRLF3Q8IUI8 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CRLF3Q8IUI8 ABHD17AP5-201ENST00000580133 923 ntBASIC23.23■■□□□ 1.31
CRLF3Q8IUI8 MED25-210ENST00000612854 801 ntTSL 5 BASIC23.23■■□□□ 1.31
CRLF3Q8IUI8 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CRLF3Q8IUI8 MED25-214ENST00000622402 642 ntTSL 5 BASIC23.23■■□□□ 1.31
CRLF3Q8IUI8 DUSP8P5-201ENST00000422884 1815 ntBASIC23.23■■□□□ 1.31
CRLF3Q8IUI8 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC23.22■■□□□ 1.31
CRLF3Q8IUI8 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CRLF3Q8IUI8 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CRLF3Q8IUI8 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CRLF3Q8IUI8 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CRLF3Q8IUI8 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
CRLF3Q8IUI8 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
CRLF3Q8IUI8 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CRLF3Q8IUI8 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC23.21■■□□□ 1.31
CRLF3Q8IUI8 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
CRLF3Q8IUI8 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CRLF3Q8IUI8 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
CRLF3Q8IUI8 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CRLF3Q8IUI8 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC23.2■■□□□ 1.3
CRLF3Q8IUI8 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CRLF3Q8IUI8 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CRLF3Q8IUI8 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
CRLF3Q8IUI8 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC23.2■■□□□ 1.3
CRLF3Q8IUI8 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CRLF3Q8IUI8 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
CRLF3Q8IUI8 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CRLF3Q8IUI8 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CRLF3Q8IUI8 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC23.2■■□□□ 1.3
CRLF3Q8IUI8 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CRLF3Q8IUI8 AC126177.7-201ENST00000547904 679 ntBASIC23.2■■□□□ 1.3
CRLF3Q8IUI8 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms