Protein–RNA interactions for Protein: Q6ZMV5

PPP4R3CP, Putative SMEK homolog 3, humanhuman

Predictions only

Length 832 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3CPQ6ZMV5 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC26.4■■□□□ 1.82
PPP4R3CPQ6ZMV5 AC007688.1-201ENST00000475592 759 ntBASIC26.4■■□□□ 1.82
PPP4R3CPQ6ZMV5 EMC4-208ENST00000559078 599 ntTSL 3 BASIC26.4■■□□□ 1.82
PPP4R3CPQ6ZMV5 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
PPP4R3CPQ6ZMV5 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
PPP4R3CPQ6ZMV5 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
PPP4R3CPQ6ZMV5 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC26.39■■□□□ 1.82
PPP4R3CPQ6ZMV5 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
PPP4R3CPQ6ZMV5 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC26.39■■□□□ 1.82
PPP4R3CPQ6ZMV5 AC107308.1-201ENST00000615897 301 ntBASIC26.39■■□□□ 1.82
PPP4R3CPQ6ZMV5 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC26.39■■□□□ 1.81
PPP4R3CPQ6ZMV5 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
PPP4R3CPQ6ZMV5 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC26.38■■□□□ 1.81
PPP4R3CPQ6ZMV5 RARRES2P1-201ENST00000474487 481 ntBASIC26.38■■□□□ 1.81
PPP4R3CPQ6ZMV5 PVT1_1.1-201ENST00000615125 194 ntBASIC26.38■■□□□ 1.81
PPP4R3CPQ6ZMV5 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
PPP4R3CPQ6ZMV5 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
PPP4R3CPQ6ZMV5 BEX3-202ENST00000372634 753 ntTSL 2 BASIC26.37■■□□□ 1.81
PPP4R3CPQ6ZMV5 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
PPP4R3CPQ6ZMV5 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
PPP4R3CPQ6ZMV5 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
PPP4R3CPQ6ZMV5 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC26.36■■□□□ 1.81
PPP4R3CPQ6ZMV5 ITGB5-AS1-201ENST00000495917 460 ntTSL 3 BASIC26.36■■□□□ 1.81
PPP4R3CPQ6ZMV5 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
PPP4R3CPQ6ZMV5 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PPP4R3CPQ6ZMV5 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PPP4R3CPQ6ZMV5 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC26.35■■□□□ 1.81
PPP4R3CPQ6ZMV5 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PPP4R3CPQ6ZMV5 IDNK-201ENST00000376417 511 ntTSL 5 BASIC26.35■■□□□ 1.81
PPP4R3CPQ6ZMV5 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PPP4R3CPQ6ZMV5 MTX2-204ENST00000443241 799 ntTSL 3 BASIC26.35■■□□□ 1.81
PPP4R3CPQ6ZMV5 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
PPP4R3CPQ6ZMV5 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
PPP4R3CPQ6ZMV5 AC019171.1-201ENST00000601251 1056 ntBASIC26.35■■□□□ 1.81
PPP4R3CPQ6ZMV5 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PPP4R3CPQ6ZMV5 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PPP4R3CPQ6ZMV5 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PPP4R3CPQ6ZMV5 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PPP4R3CPQ6ZMV5 AP001542.1-201ENST00000591314 200 ntBASIC26.34■■□□□ 1.81
PPP4R3CPQ6ZMV5 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PPP4R3CPQ6ZMV5 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
PPP4R3CPQ6ZMV5 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
PPP4R3CPQ6ZMV5 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
PPP4R3CPQ6ZMV5 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC26.33■■□□□ 1.81
PPP4R3CPQ6ZMV5 GXYLT1P3-201ENST00000453058 1193 ntBASIC26.33■■□□□ 1.81
PPP4R3CPQ6ZMV5 METTL23-207ENST00000588783 1184 ntTSL 5 BASIC26.33■■□□□ 1.81
PPP4R3CPQ6ZMV5 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.8
PPP4R3CPQ6ZMV5 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC26.33■■□□□ 1.8
PPP4R3CPQ6ZMV5 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
PPP4R3CPQ6ZMV5 AC097639.1-201ENST00000565519 1891 ntBASIC26.32■■□□□ 1.8
PPP4R3CPQ6ZMV5 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PPP4R3CPQ6ZMV5 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
PPP4R3CPQ6ZMV5 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PPP4R3CPQ6ZMV5 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC26.32■■□□□ 1.8
PPP4R3CPQ6ZMV5 CEBPA-AS1-201ENST00000592982 2198 ntBASIC26.31■■□□□ 1.8
PPP4R3CPQ6ZMV5 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
PPP4R3CPQ6ZMV5 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
PPP4R3CPQ6ZMV5 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
PPP4R3CPQ6ZMV5 LONRF2P2-201ENST00000439212 571 ntBASIC26.31■■□□□ 1.8
PPP4R3CPQ6ZMV5 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
PPP4R3CPQ6ZMV5 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC26.31■■□□□ 1.8
PPP4R3CPQ6ZMV5 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC26.31■■□□□ 1.8
PPP4R3CPQ6ZMV5 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
PPP4R3CPQ6ZMV5 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC26.3■■□□□ 1.8
PPP4R3CPQ6ZMV5 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC26.3■■□□□ 1.8
PPP4R3CPQ6ZMV5 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PPP4R3CPQ6ZMV5 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC26.3■■□□□ 1.8
PPP4R3CPQ6ZMV5 AC103834.1-201ENST00000520383 144 ntBASIC26.3■■□□□ 1.8
PPP4R3CPQ6ZMV5 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC26.3■■□□□ 1.8
PPP4R3CPQ6ZMV5 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
PPP4R3CPQ6ZMV5 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC26.3■■□□□ 1.8
PPP4R3CPQ6ZMV5 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC26.3■■□□□ 1.8
PPP4R3CPQ6ZMV5 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
PPP4R3CPQ6ZMV5 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
PPP4R3CPQ6ZMV5 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
PPP4R3CPQ6ZMV5 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
PPP4R3CPQ6ZMV5 LRRIQ3-202ENST00000370909 793 ntTSL 5 BASIC26.29■■□□□ 1.8
PPP4R3CPQ6ZMV5 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC26.29■■□□□ 1.8
PPP4R3CPQ6ZMV5 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC26.29■■□□□ 1.8
PPP4R3CPQ6ZMV5 CBR3-AS1-213ENST00000623647 815 ntTSL 5 BASIC26.29■■□□□ 1.8
PPP4R3CPQ6ZMV5 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC26.29■■□□□ 1.8
PPP4R3CPQ6ZMV5 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
PPP4R3CPQ6ZMV5 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC26.28■■□□□ 1.8
PPP4R3CPQ6ZMV5 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC26.28■■□□□ 1.8
PPP4R3CPQ6ZMV5 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PPP4R3CPQ6ZMV5 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC26.28■■□□□ 1.8
PPP4R3CPQ6ZMV5 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
PPP4R3CPQ6ZMV5 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC26.28■■□□□ 1.8
PPP4R3CPQ6ZMV5 MIR4508-201ENST00000584178 70 ntBASIC26.28■■□□□ 1.8
PPP4R3CPQ6ZMV5 SNAI3-AS1-204ENST00000567997 2048 ntBASIC26.27■■□□□ 1.8
PPP4R3CPQ6ZMV5 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
PPP4R3CPQ6ZMV5 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC26.27■■□□□ 1.8
PPP4R3CPQ6ZMV5 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
PPP4R3CPQ6ZMV5 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
PPP4R3CPQ6ZMV5 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
PPP4R3CPQ6ZMV5 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
PPP4R3CPQ6ZMV5 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
PPP4R3CPQ6ZMV5 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
PPP4R3CPQ6ZMV5 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
PPP4R3CPQ6ZMV5 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms