Protein–RNA interactions for Protein: Q5TH69

ARFGEF3, Brefeldin A-inhibited guanine nucleotide-exchange protein 3, humanhuman

Predictions only

Length 2,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF3Q5TH69 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ARFGEF3Q5TH69 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ARFGEF3Q5TH69 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.03■□□□□ 0.8
ARFGEF3Q5TH69 AC131281.2-201ENST00000520478 145 ntBASIC20.02■□□□□ 0.8
ARFGEF3Q5TH69 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.02■□□□□ 0.8
ARFGEF3Q5TH69 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ARFGEF3Q5TH69 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.02■□□□□ 0.8
ARFGEF3Q5TH69 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
ARFGEF3Q5TH69 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.79
ARFGEF3Q5TH69 FOXO3B-201ENST00000395675 1928 ntBASIC20.02■□□□□ 0.79
ARFGEF3Q5TH69 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.79
ARFGEF3Q5TH69 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.01■□□□□ 0.79
ARFGEF3Q5TH69 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ARFGEF3Q5TH69 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
ARFGEF3Q5TH69 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
ARFGEF3Q5TH69 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20■□□□□ 0.79
ARFGEF3Q5TH69 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ARFGEF3Q5TH69 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
ARFGEF3Q5TH69 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC20■□□□□ 0.79
ARFGEF3Q5TH69 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20■□□□□ 0.79
ARFGEF3Q5TH69 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
ARFGEF3Q5TH69 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20■□□□□ 0.79
ARFGEF3Q5TH69 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
ARFGEF3Q5TH69 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20■□□□□ 0.79
ARFGEF3Q5TH69 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20■□□□□ 0.79
ARFGEF3Q5TH69 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ARFGEF3Q5TH69 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20■□□□□ 0.79
ARFGEF3Q5TH69 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
ARFGEF3Q5TH69 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20■□□□□ 0.79
ARFGEF3Q5TH69 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20■□□□□ 0.79
ARFGEF3Q5TH69 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
ARFGEF3Q5TH69 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
ARFGEF3Q5TH69 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
ARFGEF3Q5TH69 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
ARFGEF3Q5TH69 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC19.99■□□□□ 0.79
ARFGEF3Q5TH69 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ARFGEF3Q5TH69 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
ARFGEF3Q5TH69 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ARFGEF3Q5TH69 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
ARFGEF3Q5TH69 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ARFGEF3Q5TH69 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC19.98■□□□□ 0.79
ARFGEF3Q5TH69 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ARFGEF3Q5TH69 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.97■□□□□ 0.79
ARFGEF3Q5TH69 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC19.97■□□□□ 0.79
ARFGEF3Q5TH69 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.97■□□□□ 0.79
ARFGEF3Q5TH69 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
ARFGEF3Q5TH69 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC19.97■□□□□ 0.79
ARFGEF3Q5TH69 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.96■□□□□ 0.79
ARFGEF3Q5TH69 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC19.96■□□□□ 0.79
ARFGEF3Q5TH69 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ARFGEF3Q5TH69 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ARFGEF3Q5TH69 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ARFGEF3Q5TH69 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.96■□□□□ 0.79
ARFGEF3Q5TH69 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.96■□□□□ 0.79
ARFGEF3Q5TH69 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ARFGEF3Q5TH69 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ARFGEF3Q5TH69 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
ARFGEF3Q5TH69 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.95■□□□□ 0.78
ARFGEF3Q5TH69 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC19.95■□□□□ 0.78
ARFGEF3Q5TH69 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
ARFGEF3Q5TH69 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
ARFGEF3Q5TH69 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.95■□□□□ 0.78
ARFGEF3Q5TH69 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ARFGEF3Q5TH69 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ARFGEF3Q5TH69 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ARFGEF3Q5TH69 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.95■□□□□ 0.78
ARFGEF3Q5TH69 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.95■□□□□ 0.78
ARFGEF3Q5TH69 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.95■□□□□ 0.78
ARFGEF3Q5TH69 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.94■□□□□ 0.78
ARFGEF3Q5TH69 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.94■□□□□ 0.78
ARFGEF3Q5TH69 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
ARFGEF3Q5TH69 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ARFGEF3Q5TH69 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ARFGEF3Q5TH69 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
ARFGEF3Q5TH69 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.94■□□□□ 0.78
ARFGEF3Q5TH69 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ARFGEF3Q5TH69 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ARFGEF3Q5TH69 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ARFGEF3Q5TH69 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.93■□□□□ 0.78
ARFGEF3Q5TH69 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.93■□□□□ 0.78
ARFGEF3Q5TH69 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC19.93■□□□□ 0.78
ARFGEF3Q5TH69 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ARFGEF3Q5TH69 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.93■□□□□ 0.78
ARFGEF3Q5TH69 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ARFGEF3Q5TH69 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.92■□□□□ 0.78
ARFGEF3Q5TH69 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC19.92■□□□□ 0.78
ARFGEF3Q5TH69 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
ARFGEF3Q5TH69 SNX5-217ENST00000606557 1087 ntBASIC19.92■□□□□ 0.78
ARFGEF3Q5TH69 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ARFGEF3Q5TH69 AC019069.1-201ENST00000610008 1333 ntBASIC19.92■□□□□ 0.78
ARFGEF3Q5TH69 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ARFGEF3Q5TH69 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
ARFGEF3Q5TH69 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
ARFGEF3Q5TH69 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC19.91■□□□□ 0.78
ARFGEF3Q5TH69 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
ARFGEF3Q5TH69 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.91■□□□□ 0.78
ARFGEF3Q5TH69 TSPY9P-201ENST00000440215 945 ntBASIC19.91■□□□□ 0.78
ARFGEF3Q5TH69 TSPY11P-201ENST00000442607 1045 ntBASIC19.91■□□□□ 0.78
ARFGEF3Q5TH69 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC19.91■□□□□ 0.78
ARFGEF3Q5TH69 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms