Protein–RNA interactions for Protein: Q07878

VPS13, Vacuolar protein sorting-associated protein 13, yeastyeast

Predictions only

Length 3,144 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS13Q07878 YNL181WYNL181W 1224 nt5.48□□□□□ -1.53
VPS13Q07878 tL(UAG)JtL(UAG)J 82 nt5.47□□□□□ -1.53
VPS13Q07878 tL(UAG)L1tL(UAG)L1 82 nt5.47□□□□□ -1.53
VPS13Q07878 tL(UAG)L2tL(UAG)L2 82 nt5.47□□□□□ -1.53
VPS13Q07878 BNA3YJL060W 1335 nt5.47□□□□□ -1.53
VPS13Q07878 GSP2YOR185C 663 nt5.46□□□□□ -1.53
VPS13Q07878 YHL017WYHL017W 1599 nt5.46□□□□□ -1.53
VPS13Q07878 YNL194CYNL194C 906 nt5.46□□□□□ -1.54
VPS13Q07878 ATR1YML116W 1629 nt5.45□□□□□ -1.54
VPS13Q07878 YDR278CYDR278C 318 nt5.45□□□□□ -1.54
VPS13Q07878 STL1YDR536W 1710 nt5.44□□□□□ -1.54
VPS13Q07878 VPS61YDR136C 573 nt5.44□□□□□ -1.54
VPS13Q07878 GEP3YOR205C 1671 nt5.44□□□□□ -1.54
VPS13Q07878 SES1YDR023W 1389 nt5.44□□□□□ -1.54
VPS13Q07878 NTH2YBR001C 2343 nt5.44□□□□□ -1.54
VPS13Q07878 FAU1YER183C 636 nt5.44□□□□□ -1.54
VPS13Q07878 RPT4YOR259C 1314 nt5.44□□□□□ -1.54
VPS13Q07878 HSP78YDR258C 2436 nt5.44□□□□□ -1.54
VPS13Q07878 ARH1YDR376W 1482 nt5.43□□□□□ -1.54
VPS13Q07878 GYP1YOR070C 1914 nt5.43□□□□□ -1.54
VPS13Q07878 YGL036WYGL036W 2730 nt5.43□□□□□ -1.54
VPS13Q07878 PUS6YGR169C 1215 nt5.43□□□□□ -1.54
VPS13Q07878 TAL1YLR354C 1008 nt5.43□□□□□ -1.54
VPS13Q07878 NMA1YLR328W 1206 nt5.42□□□□□ -1.54
VPS13Q07878 SCT1YBL011W 2280 nt5.42□□□□□ -1.54
VPS13Q07878 HXT13YEL069C 1695 nt5.42□□□□□ -1.54
VPS13Q07878 PRY3YJL078C 2646 nt5.42□□□□□ -1.54
VPS13Q07878 MNN5YJL186W 1761 nt5.42□□□□□ -1.54
VPS13Q07878 STM1YLR150W 822 nt5.41□□□□□ -1.54
VPS13Q07878 ERG20YJL167W 1059 nt5.41□□□□□ -1.54
VPS13Q07878 MRPL39YML009C 213 nt5.41□□□□□ -1.54
VPS13Q07878 AIM34YMR003W 597 nt5.41□□□□□ -1.54
VPS13Q07878 SMF2YHR050W 1650 nt5.41□□□□□ -1.54
VPS13Q07878 HAP2YGL237C 798 nt5.41□□□□□ -1.54
VPS13Q07878 KSS1YGR040W 1107 nt5.41□□□□□ -1.54
VPS13Q07878 YIF1YNL263C 945 nt5.41□□□□□ -1.54
VPS13Q07878 GPB2YAL056W 2643 nt5.4□□□□□ -1.54
VPS13Q07878 YNR040WYNR040W 771 nt5.4□□□□□ -1.54
VPS13Q07878 ASH1YKL185W 1767 nt5.4□□□□□ -1.55
VPS13Q07878 THI4YGR144W 981 nt5.4□□□□□ -1.55
VPS13Q07878 UBC4YBR082C 447 nt5.4□□□□□ -1.55
VPS13Q07878 POB3YML069W 1659 nt5.4□□□□□ -1.55
VPS13Q07878 APJ1YNL077W 1587 nt5.4□□□□□ -1.55
VPS13Q07878 STF1YDL130W-A 261 nt5.39□□□□□ -1.55
VPS13Q07878 YHR140WYHR140W 720 nt5.39□□□□□ -1.55
VPS13Q07878 SNF8YPL002C 702 nt5.39□□□□□ -1.55
VPS13Q07878 ULA1YPL003W 1389 nt5.39□□□□□ -1.55
VPS13Q07878 FAT3YKL187C 2253 nt5.39□□□□□ -1.55
VPS13Q07878 TAF11YML015C 1041 nt5.39□□□□□ -1.55
VPS13Q07878 ATG14YBR128C 1035 nt5.39□□□□□ -1.55
VPS13Q07878 ADE4YMR300C 1533 nt5.38□□□□□ -1.55
VPS13Q07878 SCM3YDL139C 672 nt5.38□□□□□ -1.55
VPS13Q07878 REI1YBR267W 1182 nt5.38□□□□□ -1.55
VPS13Q07878 GFD1YMR255W 567 nt5.38□□□□□ -1.55
VPS13Q07878 SUP2tY(GUA)D 75 nt5.37□□□□□ -1.55
VPS13Q07878 SUP11tY(GUA)F1 75 nt5.37□□□□□ -1.55
VPS13Q07878 SUP6tY(GUA)F2 75 nt5.37□□□□□ -1.55
VPS13Q07878 SUP7tY(GUA)J1 75 nt5.37□□□□□ -1.55
VPS13Q07878 SUP4tY(GUA)J2 75 nt5.37□□□□□ -1.55
VPS13Q07878 SUP5tY(GUA)M1 75 nt5.37□□□□□ -1.55
VPS13Q07878 SUP8tY(GUA)M2 75 nt5.37□□□□□ -1.55
VPS13Q07878 SUP3tY(GUA)O 75 nt5.37□□□□□ -1.55
VPS13Q07878 YOL163WYOL163W 510 nt5.37□□□□□ -1.55
VPS13Q07878 RET1YOR207C 3450 nt5.37□□□□□ -1.55
VPS13Q07878 YCR085WYCR085W 354 nt5.37□□□□□ -1.55
VPS13Q07878 YIL067CYIL067C 2037 nt5.37□□□□□ -1.55
VPS13Q07878 YME1YPR024W 2244 nt5.36□□□□□ -1.55
VPS13Q07878 DAN1YJR150C 897 nt5.36□□□□□ -1.55
VPS13Q07878 YER148W-AYER148W-A 579 nt5.36□□□□□ -1.55
VPS13Q07878 YGR035W-AYGR035W-A 222 nt5.36□□□□□ -1.55
VPS13Q07878 MPH2YDL247W 1830 nt5.35□□□□□ -1.55
VPS13Q07878 APM2YHL019C 1818 nt5.35□□□□□ -1.55
VPS13Q07878 RBD2YPL246C 789 nt5.35□□□□□ -1.55
VPS13Q07878 CAB1YDR531W 1104 nt5.35□□□□□ -1.55
VPS13Q07878 URE2YNL229C 1065 nt5.35□□□□□ -1.55
VPS13Q07878 AVT3YKL146W 2079 nt5.34□□□□□ -1.55
VPS13Q07878 RPL19AYBR084C-A 570 nt5.34□□□□□ -1.55
VPS13Q07878 HXT14YNL318C 1623 nt5.34□□□□□ -1.55
VPS13Q07878 ATG20YDL113C 1923 nt5.34□□□□□ -1.55
VPS13Q07878 UFD1YGR048W 1086 nt5.34□□□□□ -1.55
VPS13Q07878 PRM1YNL279W 1986 nt5.34□□□□□ -1.55
VPS13Q07878 MTQ2YDR140W 666 nt5.34□□□□□ -1.56
VPS13Q07878 UBC8YEL012W 657 nt5.34□□□□□ -1.56
VPS13Q07878 CUE5YOR042W 1236 nt5.34□□□□□ -1.56
VPS13Q07878 VMA4YOR332W 702 nt5.34□□□□□ -1.56
VPS13Q07878 MRS2YOR334W 1413 nt5.33□□□□□ -1.56
VPS13Q07878 RFC2YJR068W 1062 nt5.33□□□□□ -1.56
VPS13Q07878 CDC13YDL220C 2775 nt5.32□□□□□ -1.56
VPS13Q07878 YER186CYER186C 921 nt5.32□□□□□ -1.56
VPS13Q07878 ARA2YMR041C 1008 nt5.32□□□□□ -1.56
VPS13Q07878 YNL174WYNL174W 573 nt5.32□□□□□ -1.56
VPS13Q07878 DOA1YKL213C 2148 nt5.32□□□□□ -1.56
VPS13Q07878 AZR1YGR224W 1842 nt5.32□□□□□ -1.56
VPS13Q07878 PGA2YNL149C 390 nt5.32□□□□□ -1.56
VPS13Q07878 CEG1YGL130W 1380 nt5.32□□□□□ -1.56
VPS13Q07878 YEF1YEL041W 1488 nt5.31□□□□□ -1.56
VPS13Q07878 YMR253CYMR253C 1245 nt5.31□□□□□ -1.56
VPS13Q07878 ABF1YKL112W 2196 nt5.31□□□□□ -1.56
VPS13Q07878 YLR364C-AYLR364C-A 123 nt5.31□□□□□ -1.56
VPS13Q07878 SEH1YGL100W 1050 nt5.3□□□□□ -1.56
Retrieved 100 of 7,029 protein–RNA pairs in 15.2 ms