Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
RPS28P62857 GALC-202ENST00000393568 2054 ntTSL 2 BASIC13.87□□□□□ -0.19
RPS28P62857 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RPS28P62857 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RPS28P62857 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC13.87□□□□□ -0.19
RPS28P62857 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RPS28P62857 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RPS28P62857 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
RPS28P62857 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
RPS28P62857 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
RPS28P62857 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RPS28P62857 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
RPS28P62857 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC13.86□□□□□ -0.19
RPS28P62857 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC13.86□□□□□ -0.19
RPS28P62857 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC13.85□□□□□ -0.19
RPS28P62857 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RPS28P62857 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
RPS28P62857 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
RPS28P62857 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RPS28P62857 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RPS28P62857 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
RPS28P62857 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RPS28P62857 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
RPS28P62857 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RPS28P62857 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RPS28P62857 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC13.85□□□□□ -0.19
RPS28P62857 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC13.85□□□□□ -0.19
RPS28P62857 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
RPS28P62857 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC13.84□□□□□ -0.19
RPS28P62857 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC13.84□□□□□ -0.19
RPS28P62857 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RPS28P62857 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RPS28P62857 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RPS28P62857 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RPS28P62857 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RPS28P62857 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RPS28P62857 WHAMMP3-201ENST00000611636 1609 ntBASIC13.84□□□□□ -0.19
RPS28P62857 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
RPS28P62857 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RPS28P62857 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RPS28P62857 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC13.84□□□□□ -0.19
RPS28P62857 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC13.84□□□□□ -0.19
RPS28P62857 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
RPS28P62857 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
RPS28P62857 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
RPS28P62857 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
RPS28P62857 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RPS28P62857 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RPS28P62857 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RPS28P62857 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RPS28P62857 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RPS28P62857 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RPS28P62857 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC13.83□□□□□ -0.2
RPS28P62857 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RPS28P62857 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RPS28P62857 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RPS28P62857 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RPS28P62857 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RPS28P62857 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RPS28P62857 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RPS28P62857 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RPS28P62857 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
RPS28P62857 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RPS28P62857 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC13.82□□□□□ -0.2
RPS28P62857 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC13.82□□□□□ -0.2
RPS28P62857 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RPS28P62857 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
RPS28P62857 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC13.82□□□□□ -0.2
RPS28P62857 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RPS28P62857 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RPS28P62857 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RPS28P62857 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
RPS28P62857 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC13.81□□□□□ -0.2
RPS28P62857 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC13.81□□□□□ -0.2
RPS28P62857 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RPS28P62857 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
RPS28P62857 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RPS28P62857 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC13.81□□□□□ -0.2
RPS28P62857 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
RPS28P62857 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RPS28P62857 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RPS28P62857 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
RPS28P62857 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RPS28P62857 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RPS28P62857 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
RPS28P62857 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RPS28P62857 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RPS28P62857 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RPS28P62857 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RPS28P62857 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC13.8□□□□□ -0.2
RPS28P62857 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RPS28P62857 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RPS28P62857 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RPS28P62857 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RPS28P62857 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC13.8□□□□□ -0.2
RPS28P62857 AL135925.1-201ENST00000605920 1701 ntBASIC13.8□□□□□ -0.2
RPS28P62857 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RPS28P62857 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
RPS28P62857 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RPS28P62857 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms