Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC21.1■□□□□ 0.97
LSM3P62310 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC21.1■□□□□ 0.97
LSM3P62310 CALM3-209ENST00000597743 577 ntTSL 4 BASIC21.1■□□□□ 0.97
LSM3P62310 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
LSM3P62310 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LSM3P62310 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.09■□□□□ 0.97
LSM3P62310 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LSM3P62310 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC21.09■□□□□ 0.97
LSM3P62310 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LSM3P62310 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LSM3P62310 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
LSM3P62310 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LSM3P62310 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.08■□□□□ 0.97
LSM3P62310 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
LSM3P62310 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LSM3P62310 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.08■□□□□ 0.97
LSM3P62310 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LSM3P62310 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
LSM3P62310 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
LSM3P62310 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
LSM3P62310 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
LSM3P62310 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.96
LSM3P62310 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LSM3P62310 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LSM3P62310 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
LSM3P62310 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LSM3P62310 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.07■□□□□ 0.96
LSM3P62310 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LSM3P62310 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LSM3P62310 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LSM3P62310 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LSM3P62310 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LSM3P62310 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LSM3P62310 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LSM3P62310 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LSM3P62310 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LSM3P62310 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LSM3P62310 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21.06■□□□□ 0.96
LSM3P62310 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.05■□□□□ 0.96
LSM3P62310 AC233723.2-201ENST00000623798 2106 ntBASIC21.05■□□□□ 0.96
LSM3P62310 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.05■□□□□ 0.96
LSM3P62310 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LSM3P62310 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.05■□□□□ 0.96
LSM3P62310 CHML-205ENST00000638160 705 ntTSL 3 BASIC21.05■□□□□ 0.96
LSM3P62310 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
LSM3P62310 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
LSM3P62310 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.04■□□□□ 0.96
LSM3P62310 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LSM3P62310 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.04■□□□□ 0.96
LSM3P62310 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.04■□□□□ 0.96
LSM3P62310 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
LSM3P62310 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.04■□□□□ 0.96
LSM3P62310 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LSM3P62310 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
LSM3P62310 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LSM3P62310 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LSM3P62310 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LSM3P62310 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.03■□□□□ 0.96
LSM3P62310 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LSM3P62310 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.02■□□□□ 0.96
LSM3P62310 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
LSM3P62310 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
LSM3P62310 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
LSM3P62310 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LSM3P62310 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC21.02■□□□□ 0.96
LSM3P62310 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
LSM3P62310 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LSM3P62310 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.02■□□□□ 0.96
LSM3P62310 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.95
LSM3P62310 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
LSM3P62310 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
LSM3P62310 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LSM3P62310 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LSM3P62310 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LSM3P62310 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21■□□□□ 0.95
LSM3P62310 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LSM3P62310 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
LSM3P62310 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC21■□□□□ 0.95
LSM3P62310 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21■□□□□ 0.95
LSM3P62310 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21■□□□□ 0.95
LSM3P62310 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
LSM3P62310 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LSM3P62310 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
LSM3P62310 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LSM3P62310 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.99■□□□□ 0.95
LSM3P62310 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LSM3P62310 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
LSM3P62310 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LSM3P62310 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LSM3P62310 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.99■□□□□ 0.95
LSM3P62310 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LSM3P62310 AL024507.2-201ENST00000606070 2574 ntBASIC20.99■□□□□ 0.95
LSM3P62310 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.99■□□□□ 0.95
LSM3P62310 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LSM3P62310 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
LSM3P62310 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LSM3P62310 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
LSM3P62310 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LSM3P62310 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LSM3P62310 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms