Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
SEC61A1P61619 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.33■□□□□ 0.85
SEC61A1P61619 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.33■□□□□ 0.85
SEC61A1P61619 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
SEC61A1P61619 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.33■□□□□ 0.84
SEC61A1P61619 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SEC61A1P61619 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SEC61A1P61619 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
SEC61A1P61619 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
SEC61A1P61619 AC138932.3-201ENST00000567634 1902 ntBASIC20.32■□□□□ 0.84
SEC61A1P61619 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SEC61A1P61619 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SEC61A1P61619 DUX4L18-201ENST00000553347 1267 ntBASIC20.32■□□□□ 0.84
SEC61A1P61619 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SEC61A1P61619 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SEC61A1P61619 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SEC61A1P61619 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.32■□□□□ 0.84
SEC61A1P61619 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SEC61A1P61619 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.31■□□□□ 0.84
SEC61A1P61619 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SEC61A1P61619 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SEC61A1P61619 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SEC61A1P61619 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.31■□□□□ 0.84
SEC61A1P61619 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.31■□□□□ 0.84
SEC61A1P61619 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SEC61A1P61619 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SEC61A1P61619 AC010501.1-201ENST00000606270 1962 ntBASIC20.3■□□□□ 0.84
SEC61A1P61619 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SEC61A1P61619 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.3■□□□□ 0.84
SEC61A1P61619 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SEC61A1P61619 SPCS2P3-201ENST00000500401 656 ntBASIC20.3■□□□□ 0.84
SEC61A1P61619 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.3■□□□□ 0.84
SEC61A1P61619 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
SEC61A1P61619 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.3■□□□□ 0.84
SEC61A1P61619 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.29■□□□□ 0.84
SEC61A1P61619 DUX4L9-201ENST00000449051 1259 ntBASIC20.29■□□□□ 0.84
SEC61A1P61619 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SEC61A1P61619 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SEC61A1P61619 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SEC61A1P61619 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SEC61A1P61619 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SEC61A1P61619 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SEC61A1P61619 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SEC61A1P61619 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
SEC61A1P61619 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SEC61A1P61619 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.28■□□□□ 0.84
SEC61A1P61619 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SEC61A1P61619 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SEC61A1P61619 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
SEC61A1P61619 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.27■□□□□ 0.84
SEC61A1P61619 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SEC61A1P61619 AC022211.4-201ENST00000625094 2161 ntBASIC20.27■□□□□ 0.84
SEC61A1P61619 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SEC61A1P61619 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
SEC61A1P61619 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.27■□□□□ 0.83
SEC61A1P61619 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SEC61A1P61619 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SEC61A1P61619 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SEC61A1P61619 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.26■□□□□ 0.83
SEC61A1P61619 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.26■□□□□ 0.83
SEC61A1P61619 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SEC61A1P61619 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
SEC61A1P61619 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SEC61A1P61619 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
SEC61A1P61619 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SEC61A1P61619 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
SEC61A1P61619 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SEC61A1P61619 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SEC61A1P61619 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SEC61A1P61619 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.25■□□□□ 0.83
SEC61A1P61619 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SEC61A1P61619 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
SEC61A1P61619 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SEC61A1P61619 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SEC61A1P61619 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
SEC61A1P61619 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SEC61A1P61619 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
SEC61A1P61619 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SEC61A1P61619 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SEC61A1P61619 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.25■□□□□ 0.83
SEC61A1P61619 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.25■□□□□ 0.83
SEC61A1P61619 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SEC61A1P61619 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SEC61A1P61619 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SEC61A1P61619 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
SEC61A1P61619 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SEC61A1P61619 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
SEC61A1P61619 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SEC61A1P61619 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SEC61A1P61619 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SEC61A1P61619 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
SEC61A1P61619 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.24■□□□□ 0.83
SEC61A1P61619 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.24■□□□□ 0.83
SEC61A1P61619 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.24■□□□□ 0.83
SEC61A1P61619 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
SEC61A1P61619 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SEC61A1P61619 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SEC61A1P61619 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SEC61A1P61619 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SEC61A1P61619 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms