Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC18.95■□□□□ 0.62
SPCS3P61009 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC18.95■□□□□ 0.62
SPCS3P61009 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
SPCS3P61009 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC18.94■□□□□ 0.62
SPCS3P61009 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
SPCS3P61009 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC18.94■□□□□ 0.62
SPCS3P61009 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SPCS3P61009 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SPCS3P61009 MACF1-219ENST00000484793 834 ntTSL 2 BASIC18.94■□□□□ 0.62
SPCS3P61009 MIR3960-201ENST00000583311 91 ntBASIC18.94■□□□□ 0.62
SPCS3P61009 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC18.94■□□□□ 0.62
SPCS3P61009 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SPCS3P61009 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SPCS3P61009 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SPCS3P61009 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SPCS3P61009 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SPCS3P61009 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SPCS3P61009 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC18.93■□□□□ 0.62
SPCS3P61009 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SPCS3P61009 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SPCS3P61009 AC025884.2-201ENST00000553429 711 ntBASIC18.93■□□□□ 0.62
SPCS3P61009 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SPCS3P61009 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SPCS3P61009 AL024507.2-201ENST00000606070 2574 ntBASIC18.92■□□□□ 0.62
SPCS3P61009 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SPCS3P61009 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC18.92■□□□□ 0.62
SPCS3P61009 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC18.92■□□□□ 0.62
SPCS3P61009 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SPCS3P61009 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
SPCS3P61009 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SPCS3P61009 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
SPCS3P61009 METRNL-202ENST00000570778 967 ntTSL 5 BASIC18.92■□□□□ 0.62
SPCS3P61009 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SPCS3P61009 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SPCS3P61009 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SPCS3P61009 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SPCS3P61009 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SPCS3P61009 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SPCS3P61009 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC18.91■□□□□ 0.62
SPCS3P61009 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
SPCS3P61009 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SPCS3P61009 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SPCS3P61009 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SPCS3P61009 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SPCS3P61009 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SPCS3P61009 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
SPCS3P61009 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SPCS3P61009 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC18.9■□□□□ 0.62
SPCS3P61009 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SPCS3P61009 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SPCS3P61009 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
SPCS3P61009 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC18.9■□□□□ 0.62
SPCS3P61009 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC18.9■□□□□ 0.62
SPCS3P61009 AL157400.5-201ENST00000507624 621 ntBASIC18.9■□□□□ 0.62
SPCS3P61009 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC18.9■□□□□ 0.62
SPCS3P61009 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
SPCS3P61009 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC18.9■□□□□ 0.62
SPCS3P61009 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SPCS3P61009 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SPCS3P61009 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.9■□□□□ 0.62
SPCS3P61009 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SPCS3P61009 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
SPCS3P61009 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SPCS3P61009 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SPCS3P61009 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SPCS3P61009 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SPCS3P61009 MIR6089-201ENST00000616698 64 ntBASIC18.89■□□□□ 0.61
SPCS3P61009 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SPCS3P61009 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SPCS3P61009 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SPCS3P61009 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SPCS3P61009 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SPCS3P61009 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SPCS3P61009 ABHD17AP4-201ENST00000411545 909 ntBASIC18.88■□□□□ 0.61
SPCS3P61009 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC18.88■□□□□ 0.61
SPCS3P61009 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
SPCS3P61009 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SPCS3P61009 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
SPCS3P61009 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SPCS3P61009 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SPCS3P61009 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SPCS3P61009 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SPCS3P61009 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SPCS3P61009 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SPCS3P61009 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
SPCS3P61009 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SPCS3P61009 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SPCS3P61009 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC18.87■□□□□ 0.61
SPCS3P61009 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SPCS3P61009 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SPCS3P61009 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC18.87■□□□□ 0.61
SPCS3P61009 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SPCS3P61009 AC016575.1-201ENST00000607026 382 ntBASIC18.87■□□□□ 0.61
SPCS3P61009 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SPCS3P61009 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SPCS3P61009 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SPCS3P61009 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SPCS3P61009 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
SPCS3P61009 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC18.86■□□□□ 0.61
SPCS3P61009 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms