Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDH12P55289 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDH12P55289 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDH12P55289 RP9P-202ENST00000450133 1212 ntBASIC21.78■■□□□ 1.08
CDH12P55289 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.78■■□□□ 1.08
CDH12P55289 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDH12P55289 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.78■■□□□ 1.08
CDH12P55289 AC141586.4-201ENST00000624558 1573 ntBASIC21.78■■□□□ 1.08
CDH12P55289 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDH12P55289 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
CDH12P55289 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
CDH12P55289 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
CDH12P55289 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDH12P55289 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDH12P55289 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC21.77■■□□□ 1.08
CDH12P55289 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.77■■□□□ 1.08
CDH12P55289 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
CDH12P55289 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
CDH12P55289 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC21.77■■□□□ 1.07
CDH12P55289 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
CDH12P55289 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDH12P55289 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21.76■■□□□ 1.07
CDH12P55289 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC21.76■■□□□ 1.07
CDH12P55289 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CDH12P55289 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDH12P55289 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.76■■□□□ 1.07
CDH12P55289 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDH12P55289 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CDH12P55289 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.75■■□□□ 1.07
CDH12P55289 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDH12P55289 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CDH12P55289 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDH12P55289 AC093536.1-201ENST00000569153 554 ntBASIC21.75■■□□□ 1.07
CDH12P55289 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
CDH12P55289 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.75■■□□□ 1.07
CDH12P55289 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDH12P55289 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
CDH12P55289 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.74■■□□□ 1.07
CDH12P55289 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDH12P55289 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CDH12P55289 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDH12P55289 GPX1-201ENST00000419349 1106 ntBASIC21.74■■□□□ 1.07
CDH12P55289 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CDH12P55289 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CDH12P55289 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDH12P55289 AC007029.1-201ENST00000604183 313 ntBASIC21.74■■□□□ 1.07
CDH12P55289 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC21.74■■□□□ 1.07
CDH12P55289 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDH12P55289 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDH12P55289 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC21.73■■□□□ 1.07
CDH12P55289 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC21.73■■□□□ 1.07
CDH12P55289 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDH12P55289 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDH12P55289 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CDH12P55289 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDH12P55289 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDH12P55289 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDH12P55289 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDH12P55289 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDH12P55289 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC21.72■■□□□ 1.07
CDH12P55289 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
CDH12P55289 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC21.72■■□□□ 1.07
CDH12P55289 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDH12P55289 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDH12P55289 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
CDH12P55289 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CDH12P55289 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.71■■□□□ 1.07
CDH12P55289 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
CDH12P55289 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDH12P55289 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDH12P55289 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDH12P55289 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.71■■□□□ 1.07
CDH12P55289 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDH12P55289 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.71■■□□□ 1.07
CDH12P55289 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.71■■□□□ 1.07
CDH12P55289 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
CDH12P55289 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC21.71■■□□□ 1.07
CDH12P55289 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CDH12P55289 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDH12P55289 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CDH12P55289 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDH12P55289 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CDH12P55289 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDH12P55289 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.7■■□□□ 1.07
CDH12P55289 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
CDH12P55289 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.7■■□□□ 1.06
CDH12P55289 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC21.7■■□□□ 1.06
CDH12P55289 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
CDH12P55289 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CDH12P55289 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.7■■□□□ 1.06
CDH12P55289 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDH12P55289 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.69■■□□□ 1.06
CDH12P55289 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDH12P55289 AC004812.2-201ENST00000611079 2094 ntBASIC21.69■■□□□ 1.06
CDH12P55289 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
CDH12P55289 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC21.69■■□□□ 1.06
CDH12P55289 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDH12P55289 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDH12P55289 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDH12P55289 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms