Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
NUBP1P53384 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
NUBP1P53384 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
NUBP1P53384 AL138724.1-201ENST00000606771 1088 ntBASIC23.72■■□□□ 1.39
NUBP1P53384 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
NUBP1P53384 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC23.72■■□□□ 1.39
NUBP1P53384 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
NUBP1P53384 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
NUBP1P53384 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
NUBP1P53384 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC23.71■■□□□ 1.39
NUBP1P53384 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
NUBP1P53384 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC23.71■■□□□ 1.39
NUBP1P53384 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC23.71■■□□□ 1.39
NUBP1P53384 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC23.71■■□□□ 1.39
NUBP1P53384 RHOF-204ENST00000537265 699 ntTSL 2 BASIC23.71■■□□□ 1.39
NUBP1P53384 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
NUBP1P53384 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
NUBP1P53384 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC23.7■■□□□ 1.38
NUBP1P53384 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC23.69■■□□□ 1.38
NUBP1P53384 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
NUBP1P53384 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
NUBP1P53384 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
NUBP1P53384 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC23.69■■□□□ 1.38
NUBP1P53384 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
NUBP1P53384 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
NUBP1P53384 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC23.69■■□□□ 1.38
NUBP1P53384 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC23.69■■□□□ 1.38
NUBP1P53384 AC011298.3-201ENST00000615796 283 ntBASIC23.69■■□□□ 1.38
NUBP1P53384 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC23.69■■□□□ 1.38
NUBP1P53384 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
NUBP1P53384 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC23.68■■□□□ 1.38
NUBP1P53384 DENND3-207ENST00000518347 850 ntTSL 2 BASIC23.68■■□□□ 1.38
NUBP1P53384 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
NUBP1P53384 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
NUBP1P53384 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
NUBP1P53384 SP2-202ENST00000613139 908 ntTSL 5 BASIC23.67■■□□□ 1.38
NUBP1P53384 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
NUBP1P53384 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
NUBP1P53384 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC23.66■■□□□ 1.38
NUBP1P53384 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
NUBP1P53384 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC23.66■■□□□ 1.38
NUBP1P53384 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC23.66■■□□□ 1.38
NUBP1P53384 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
NUBP1P53384 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
NUBP1P53384 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC23.65■■□□□ 1.38
NUBP1P53384 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC23.65■■□□□ 1.38
NUBP1P53384 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC23.65■■□□□ 1.38
NUBP1P53384 KRT18P5-201ENST00000436075 1291 ntBASIC23.65■■□□□ 1.38
NUBP1P53384 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC23.65■■□□□ 1.38
NUBP1P53384 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC23.65■■□□□ 1.38
NUBP1P53384 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC23.65■■□□□ 1.38
NUBP1P53384 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC23.65■■□□□ 1.38
NUBP1P53384 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC23.64■■□□□ 1.37
NUBP1P53384 AC092437.1-201ENST00000624794 1048 ntBASIC23.64■■□□□ 1.37
NUBP1P53384 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
NUBP1P53384 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
NUBP1P53384 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
NUBP1P53384 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
NUBP1P53384 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC23.63■■□□□ 1.37
NUBP1P53384 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
NUBP1P53384 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC23.63■■□□□ 1.37
NUBP1P53384 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC23.63■■□□□ 1.37
NUBP1P53384 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
NUBP1P53384 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
NUBP1P53384 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC23.62■■□□□ 1.37
NUBP1P53384 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC23.62■■□□□ 1.37
NUBP1P53384 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
NUBP1P53384 AC008764.7-201ENST00000593779 1081 ntBASIC23.62■■□□□ 1.37
NUBP1P53384 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
NUBP1P53384 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
NUBP1P53384 AC099791.1-201ENST00000416440 715 ntBASIC23.61■■□□□ 1.37
NUBP1P53384 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC23.61■■□□□ 1.37
NUBP1P53384 MPST-208ENST00000628507 698 ntTSL 5 BASIC23.61■■□□□ 1.37
NUBP1P53384 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC23.61■■□□□ 1.37
NUBP1P53384 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
NUBP1P53384 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
NUBP1P53384 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
NUBP1P53384 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
NUBP1P53384 SERBP1P1-201ENST00000396021 1160 ntBASIC23.6■■□□□ 1.37
NUBP1P53384 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC23.6■■□□□ 1.37
NUBP1P53384 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC23.6■■□□□ 1.37
NUBP1P53384 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC23.6■■□□□ 1.37
NUBP1P53384 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
NUBP1P53384 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC23.6■■□□□ 1.37
NUBP1P53384 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC23.59■■□□□ 1.37
NUBP1P53384 YBX1P1-201ENST00000445822 960 ntBASIC23.59■■□□□ 1.37
NUBP1P53384 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC23.59■■□□□ 1.37
NUBP1P53384 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
NUBP1P53384 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC23.59■■□□□ 1.37
NUBP1P53384 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
NUBP1P53384 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
NUBP1P53384 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
NUBP1P53384 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC23.58■■□□□ 1.37
NUBP1P53384 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
NUBP1P53384 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.37
NUBP1P53384 DLX3-202ENST00000512495 834 ntTSL 2 BASIC23.58■■□□□ 1.37
NUBP1P53384 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
NUBP1P53384 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC23.57■■□□□ 1.36
NUBP1P53384 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
NUBP1P53384 PROC-203ENST00000409048 1586 ntTSL 5 BASIC23.57■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms