Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
HMGA2P52926 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.52■■□□□ 1.03
HMGA2P52926 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HMGA2P52926 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
HMGA2P52926 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
HMGA2P52926 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HMGA2P52926 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
HMGA2P52926 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HMGA2P52926 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.51■■□□□ 1.03
HMGA2P52926 AC016575.1-201ENST00000607026 382 ntBASIC21.51■■□□□ 1.03
HMGA2P52926 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.51■■□□□ 1.03
HMGA2P52926 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HMGA2P52926 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
HMGA2P52926 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HMGA2P52926 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
HMGA2P52926 ABCB10P4-201ENST00000566803 2184 ntBASIC21.5■■□□□ 1.03
HMGA2P52926 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
HMGA2P52926 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HMGA2P52926 HLA-L-211ENST00000482052 1765 ntBASIC21.49■■□□□ 1.03
HMGA2P52926 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
HMGA2P52926 AC092296.2-201ENST00000589470 999 ntBASIC21.49■■□□□ 1.03
HMGA2P52926 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
HMGA2P52926 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HMGA2P52926 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HMGA2P52926 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
HMGA2P52926 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.48■■□□□ 1.03
HMGA2P52926 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
HMGA2P52926 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
HMGA2P52926 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
HMGA2P52926 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
HMGA2P52926 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
HMGA2P52926 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HMGA2P52926 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HMGA2P52926 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
HMGA2P52926 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
HMGA2P52926 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
HMGA2P52926 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
HMGA2P52926 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.47■■□□□ 1.03
HMGA2P52926 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HMGA2P52926 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
HMGA2P52926 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
HMGA2P52926 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
HMGA2P52926 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
HMGA2P52926 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
HMGA2P52926 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
HMGA2P52926 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC21.46■■□□□ 1.03
HMGA2P52926 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
HMGA2P52926 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.46■■□□□ 1.03
HMGA2P52926 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
HMGA2P52926 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.03
HMGA2P52926 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
HMGA2P52926 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HMGA2P52926 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.45■■□□□ 1.02
HMGA2P52926 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
HMGA2P52926 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
HMGA2P52926 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC21.44■■□□□ 1.02
HMGA2P52926 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
HMGA2P52926 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
HMGA2P52926 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.44■■□□□ 1.02
HMGA2P52926 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
HMGA2P52926 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
HMGA2P52926 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
HMGA2P52926 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
HMGA2P52926 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
HMGA2P52926 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.44■■□□□ 1.02
HMGA2P52926 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC21.44■■□□□ 1.02
HMGA2P52926 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC21.44■■□□□ 1.02
HMGA2P52926 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.43■■□□□ 1.02
HMGA2P52926 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
HMGA2P52926 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HMGA2P52926 RP9P-202ENST00000450133 1212 ntBASIC21.43■■□□□ 1.02
HMGA2P52926 ECEL1P2-201ENST00000461596 1295 ntBASIC21.43■■□□□ 1.02
HMGA2P52926 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.43■■□□□ 1.02
HMGA2P52926 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.43■■□□□ 1.02
HMGA2P52926 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
HMGA2P52926 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
HMGA2P52926 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.43■■□□□ 1.02
HMGA2P52926 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
HMGA2P52926 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
HMGA2P52926 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.42■■□□□ 1.02
HMGA2P52926 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.42■■□□□ 1.02
HMGA2P52926 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
HMGA2P52926 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HMGA2P52926 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HMGA2P52926 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
HMGA2P52926 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HMGA2P52926 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
HMGA2P52926 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.41■■□□□ 1.02
HMGA2P52926 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HMGA2P52926 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
HMGA2P52926 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
HMGA2P52926 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
HMGA2P52926 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
HMGA2P52926 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
HMGA2P52926 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
HMGA2P52926 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
HMGA2P52926 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
HMGA2P52926 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
HMGA2P52926 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
HMGA2P52926 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms