Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 CEBPA-AS1-201ENST00000592982 2198 ntBASIC23.06■■□□□ 1.28
CLCNKAP51800 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CLCNKAP51800 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CLCNKAP51800 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CLCNKAP51800 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CLCNKAP51800 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CLCNKAP51800 OR2A1-AS1-204ENST00000470435 602 ntBASIC23.05■■□□□ 1.28
CLCNKAP51800 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC23.05■■□□□ 1.28
CLCNKAP51800 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC23.05■■□□□ 1.28
CLCNKAP51800 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC23.05■■□□□ 1.28
CLCNKAP51800 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC23.05■■□□□ 1.28
CLCNKAP51800 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CLCNKAP51800 MIR4281-201ENST00000580852 62 ntBASIC23.04■■□□□ 1.28
CLCNKAP51800 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CLCNKAP51800 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC23.04■■□□□ 1.28
CLCNKAP51800 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CLCNKAP51800 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CLCNKAP51800 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CLCNKAP51800 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CLCNKAP51800 BX664725.1-201ENST00000438252 379 ntBASIC23.02■■□□□ 1.28
CLCNKAP51800 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC23.02■■□□□ 1.28
CLCNKAP51800 GAK-223ENST00000628912 497 ntTSL 5 BASIC23.02■■□□□ 1.28
CLCNKAP51800 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
CLCNKAP51800 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC23.02■■□□□ 1.28
CLCNKAP51800 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC23.01■■□□□ 1.27
CLCNKAP51800 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CLCNKAP51800 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CLCNKAP51800 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CLCNKAP51800 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
CLCNKAP51800 GUSBP5-201ENST00000418136 578 ntBASIC23.01■■□□□ 1.27
CLCNKAP51800 AC239859.2-201ENST00000444165 318 ntBASIC23.01■■□□□ 1.27
CLCNKAP51800 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC23.01■■□□□ 1.27
CLCNKAP51800 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC23.01■■□□□ 1.27
CLCNKAP51800 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CLCNKAP51800 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
CLCNKAP51800 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23■■□□□ 1.27
CLCNKAP51800 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC23■■□□□ 1.27
CLCNKAP51800 SLC6A10P-202ENST00000431994 2058 ntBASIC23■■□□□ 1.27
CLCNKAP51800 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CLCNKAP51800 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CLCNKAP51800 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CLCNKAP51800 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CLCNKAP51800 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC22.99■■□□□ 1.27
CLCNKAP51800 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
CLCNKAP51800 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC22.99■■□□□ 1.27
CLCNKAP51800 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
CLCNKAP51800 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC22.99■■□□□ 1.27
CLCNKAP51800 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CLCNKAP51800 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC22.99■■□□□ 1.27
CLCNKAP51800 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC22.98■■□□□ 1.27
CLCNKAP51800 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CLCNKAP51800 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CLCNKAP51800 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CLCNKAP51800 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC22.98■■□□□ 1.27
CLCNKAP51800 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CLCNKAP51800 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC22.98■■□□□ 1.27
CLCNKAP51800 KRT125P-201ENST00000546827 989 ntBASIC22.98■■□□□ 1.27
CLCNKAP51800 AC090877.2-201ENST00000558441 1738 ntBASIC22.98■■□□□ 1.27
CLCNKAP51800 AC021242.3-201ENST00000607598 1377 ntBASIC22.98■■□□□ 1.27
CLCNKAP51800 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CLCNKAP51800 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC22.97■■□□□ 1.27
CLCNKAP51800 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC22.97■■□□□ 1.27
CLCNKAP51800 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC22.97■■□□□ 1.27
CLCNKAP51800 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC22.97■■□□□ 1.27
CLCNKAP51800 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
CLCNKAP51800 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC22.97■■□□□ 1.27
CLCNKAP51800 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
CLCNKAP51800 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CLCNKAP51800 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CLCNKAP51800 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
CLCNKAP51800 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC22.96■■□□□ 1.27
CLCNKAP51800 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CLCNKAP51800 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC22.96■■□□□ 1.27
CLCNKAP51800 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CLCNKAP51800 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CLCNKAP51800 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
CLCNKAP51800 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC22.95■■□□□ 1.26
CLCNKAP51800 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
CLCNKAP51800 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.26
CLCNKAP51800 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.26
CLCNKAP51800 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC22.95■■□□□ 1.26
CLCNKAP51800 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC22.95■■□□□ 1.26
CLCNKAP51800 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.26
CLCNKAP51800 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC22.95■■□□□ 1.26
CLCNKAP51800 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC22.95■■□□□ 1.26
CLCNKAP51800 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CLCNKAP51800 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CLCNKAP51800 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CLCNKAP51800 MIR4787-201ENST00000607364 84 ntBASIC22.94■■□□□ 1.26
CLCNKAP51800 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CLCNKAP51800 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
CLCNKAP51800 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CLCNKAP51800 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
CLCNKAP51800 SHF-207ENST00000560540 2062 ntTSL 5 BASIC22.94■■□□□ 1.26
CLCNKAP51800 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CLCNKAP51800 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
CLCNKAP51800 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC22.93■■□□□ 1.26
CLCNKAP51800 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC22.93■■□□□ 1.26
CLCNKAP51800 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC22.93■■□□□ 1.26
CLCNKAP51800 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC22.93■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms