Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CBX5P45973 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CBX5P45973 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CBX5P45973 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CBX5P45973 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CBX5P45973 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CBX5P45973 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CBX5P45973 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.02■□□□□ 0.8
CBX5P45973 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CBX5P45973 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CBX5P45973 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
CBX5P45973 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.02■□□□□ 0.79
CBX5P45973 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CBX5P45973 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CBX5P45973 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.01■□□□□ 0.79
CBX5P45973 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CBX5P45973 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CBX5P45973 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CBX5P45973 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.01■□□□□ 0.79
CBX5P45973 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.01■□□□□ 0.79
CBX5P45973 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20■□□□□ 0.79
CBX5P45973 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CBX5P45973 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20■□□□□ 0.79
CBX5P45973 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CBX5P45973 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CBX5P45973 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20■□□□□ 0.79
CBX5P45973 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20■□□□□ 0.79
CBX5P45973 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20■□□□□ 0.79
CBX5P45973 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20■□□□□ 0.79
CBX5P45973 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
CBX5P45973 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CBX5P45973 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CBX5P45973 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CBX5P45973 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC20■□□□□ 0.79
CBX5P45973 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CBX5P45973 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20■□□□□ 0.79
CBX5P45973 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CBX5P45973 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CBX5P45973 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.99■□□□□ 0.79
CBX5P45973 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
CBX5P45973 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CBX5P45973 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CBX5P45973 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19.99■□□□□ 0.79
CBX5P45973 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CBX5P45973 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CBX5P45973 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CBX5P45973 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CBX5P45973 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CBX5P45973 PKD1P6-201ENST00000343738 4769 ntBASIC19.98■□□□□ 0.79
CBX5P45973 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CBX5P45973 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CBX5P45973 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CBX5P45973 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
CBX5P45973 AC126177.7-201ENST00000547904 679 ntBASIC19.98■□□□□ 0.79
CBX5P45973 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CBX5P45973 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CBX5P45973 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
CBX5P45973 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CBX5P45973 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
CBX5P45973 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CBX5P45973 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CBX5P45973 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CBX5P45973 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CBX5P45973 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CBX5P45973 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CBX5P45973 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC19.96■□□□□ 0.79
CBX5P45973 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CBX5P45973 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
CBX5P45973 HGH1-207ENST00000628266 258 ntTSL 5 BASIC19.96■□□□□ 0.79
CBX5P45973 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CBX5P45973 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CBX5P45973 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CBX5P45973 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.96■□□□□ 0.79
CBX5P45973 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CBX5P45973 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC19.95■□□□□ 0.78
CBX5P45973 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
CBX5P45973 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.95■□□□□ 0.78
CBX5P45973 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.95■□□□□ 0.78
CBX5P45973 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CBX5P45973 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
CBX5P45973 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CBX5P45973 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.95■□□□□ 0.78
CBX5P45973 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CBX5P45973 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CBX5P45973 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CBX5P45973 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CBX5P45973 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CBX5P45973 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CBX5P45973 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CBX5P45973 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
CBX5P45973 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CBX5P45973 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CBX5P45973 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CBX5P45973 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CBX5P45973 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC19.94■□□□□ 0.78
CBX5P45973 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CBX5P45973 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CBX5P45973 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
CBX5P45973 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CBX5P45973 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms