Protein–RNA interactions for Protein: P39005

KRE9, Cell wall synthesis protein KRE9, yeast

Predictions only

Length 276 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
KRE9	P39005	GUF1	YLR289W	1938 nt		4.4	□□□□□ -1.7
KRE9	P39005	QNS1	YHR074W	2145 nt		4.4	□□□□□ -1.7
KRE9	P39005	HIR1	YBL008W	2523 nt		4.4	□□□□□ -1.7
KRE9	P39005	AIM3	YBR108W	2844 nt		4.4	□□□□□ -1.7
KRE9	P39005	YDL218W	YDL218W	954 nt		4.4	□□□□□ -1.71
KRE9	P39005	DUO1	YGL061C	744 nt		4.4	□□□□□ -1.71
KRE9	P39005	SAY1	YGR263C	1275 nt		4.4	□□□□□ -1.71
KRE9	P39005	YHL018W	YHL018W	363 nt		4.4	□□□□□ -1.71
KRE9	P39005	SUP2	tY(GUA)D	75 nt		4.4	□□□□□ -1.71
KRE9	P39005	SUP11	tY(GUA)F1	75 nt		4.4	□□□□□ -1.71
KRE9	P39005	SUP6	tY(GUA)F2	75 nt		4.4	□□□□□ -1.71
KRE9	P39005	SUP7	tY(GUA)J1	75 nt		4.4	□□□□□ -1.71
KRE9	P39005	SUP4	tY(GUA)J2	75 nt		4.4	□□□□□ -1.71
KRE9	P39005	SUP5	tY(GUA)M1	75 nt		4.4	□□□□□ -1.71
KRE9	P39005	SUP8	tY(GUA)M2	75 nt		4.4	□□□□□ -1.71
KRE9	P39005	SUP3	tY(GUA)O	75 nt		4.4	□□□□□ -1.71
KRE9	P39005	CDC11	YJR076C	1248 nt		4.4	□□□□□ -1.71
KRE9	P39005	JNM1	YMR294W	1122 nt		4.4	□□□□□ -1.71
KRE9	P39005	YNL285W	YNL285W	372 nt		4.4	□□□□□ -1.71
KRE9	P39005	YOL038C-A	YOL038C-A	96 nt		4.4	□□□□□ -1.71
KRE9	P39005	YOR020W-A	YOR020W-A	273 nt		4.4	□□□□□ -1.71
KRE9	P39005	VPS28	YPL065W	729 nt		4.4	□□□□□ -1.71
KRE9	P39005	ATG7	YHR171W	1893 nt		4.4	□□□□□ -1.71
KRE9	P39005	STD1	YOR047C	1335 nt		4.4	□□□□□ -1.71
KRE9	P39005	YEL075W-A	YEL075W-A	612 nt		4.39	□□□□□ -1.71
KRE9	P39005	ADH4	YGL256W	1149 nt		4.39	□□□□□ -1.71
KRE9	P39005	HGH1	YGR187C	1185 nt		4.39	□□□□□ -1.71
KRE9	P39005	KRE9	YJL174W	831 nt		4.39	□□□□□ -1.71
KRE9	P39005	YLR463C	YLR463C	552 nt		4.39	□□□□□ -1.71
KRE9	P39005	YML018C	YML018C	1182 nt		4.39	□□□□□ -1.71
KRE9	P39005	HAP3	YBL021C	435 nt		4.39	□□□□□ -1.71
KRE9	P39005	SFT2	YBL102W	648 nt		4.39	□□□□□ -1.71
KRE9	P39005	NHP6B	YBR089C-A	300 nt		4.39	□□□□□ -1.71
KRE9	P39005	DSF1	YEL070W	1509 nt		4.39	□□□□□ -1.71
KRE9	P39005	YNR073C	YNR073C	1509 nt		4.39	□□□□□ -1.71
KRE9	P39005	ECM7	YLR443W	1347 nt		4.39	□□□□□ -1.71
KRE9	P39005	SKN1	YGR143W	2316 nt		4.39	□□□□□ -1.71
KRE9	P39005	VHS1	YDR247W	1386 nt		4.39	□□□□□ -1.71
KRE9	P39005	VPS70	YJR126C	2436 nt		4.38	□□□□□ -1.71
KRE9	P39005	GPB2	YAL056W	2643 nt		4.38	□□□□□ -1.71
KRE9	P39005	YDR541C	YDR541C	1035 nt		4.38	□□□□□ -1.71
KRE9	P39005	RPN11	YFR004W	921 nt		4.38	□□□□□ -1.71
KRE9	P39005	FZF1	YGL254W	900 nt		4.38	□□□□□ -1.71
KRE9	P39005	OKP1	YGR179C	1221 nt		4.38	□□□□□ -1.71
KRE9	P39005	YLF2	YHL014C	1218 nt		4.38	□□□□□ -1.71
KRE9	P39005	YIR020W-A	YIR020W-A	243 nt		4.38	□□□□□ -1.71
KRE9	P39005	YKR104W	YKR104W	921 nt		4.38	□□□□□ -1.71
KRE9	P39005	BLS1	YLR408C	369 nt		4.38	□□□□□ -1.71
KRE9	P39005	YNR040W	YNR040W	771 nt		4.38	□□□□□ -1.71
KRE9	P39005	BAG7	YOR134W	1230 nt		4.38	□□□□□ -1.71
KRE9	P39005	LDB19	YOR322C	2457 nt		4.38	□□□□□ -1.71
KRE9	P39005	YEL020C	YEL020C	1683 nt		4.38	□□□□□ -1.71
KRE9	P39005	ATG4	YNL223W	1485 nt		4.37	□□□□□ -1.71
KRE9	P39005	RTG3	YBL103C	1461 nt		4.37	□□□□□ -1.71
KRE9	P39005	SKI8	YGL213C	1194 nt		4.37	□□□□□ -1.71
KRE9	P39005	MRP13	YGR084C	1020 nt		4.37	□□□□□ -1.71
KRE9	P39005	RPE1	YJL121C	717 nt		4.37	□□□□□ -1.71
KRE9	P39005	YKL169C	YKL169C	384 nt		4.37	□□□□□ -1.71
KRE9	P39005	FSF1	YOR271C	984 nt		4.37	□□□□□ -1.71
KRE9	P39005	YPR109W	YPR109W	885 nt		4.37	□□□□□ -1.71
KRE9	P39005	SFB3	YHR098C	2790 nt		4.36	□□□□□ -1.71
KRE9	P39005	MCM3	YEL032W	2916 nt		4.36	□□□□□ -1.71
KRE9	P39005	YDL023C	YDL023C	321 nt		4.36	□□□□□ -1.71
KRE9	P39005	PSR1	YLL010C	1284 nt		4.36	□□□□□ -1.71
KRE9	P39005	YLL059C	YLL059C	507 nt		4.36	□□□□□ -1.71
KRE9	P39005	YLR169W	YLR169W	354 nt		4.36	□□□□□ -1.71
KRE9	P39005	RNH201	YNL072W	924 nt		4.36	□□□□□ -1.71
KRE9	P39005	IRC14	YOR135C	342 nt		4.36	□□□□□ -1.71
KRE9	P39005	VMA4	YOR332W	702 nt		4.36	□□□□□ -1.71
KRE9	P39005	RPN7	YPR108W	1290 nt		4.36	□□□□□ -1.71
KRE9	P39005	UTP4	YDR324C	2331 nt		4.35	□□□□□ -1.71
KRE9	P39005	RAD24	YER173W	1980 nt		4.35	□□□□□ -1.71
KRE9	P39005	ERV14	YGL054C	417 nt		4.35	□□□□□ -1.71
KRE9	P39005	FSH1	YHR049W	732 nt		4.35	□□□□□ -1.71
KRE9	P39005	CTL1	YMR180C	963 nt		4.35	□□□□□ -1.71
KRE9	P39005	MTF1	YMR228W	1026 nt		4.35	□□□□□ -1.71
KRE9	P39005	SCP1	YOR367W	603 nt		4.35	□□□□□ -1.71
KRE9	P39005	RAD3	YER171W	2337 nt		4.35	□□□□□ -1.71
KRE9	P39005	GPA1	YHR005C	1419 nt		4.35	□□□□□ -1.71
KRE9	P39005	STE13	YOR219C	2796 nt		4.35	□□□□□ -1.71
KRE9	P39005	TIM22	YDL217C	624 nt		4.34	□□□□□ -1.71
KRE9	P39005	UPS3	YDR185C	540 nt		4.34	□□□□□ -1.71
KRE9	P39005	YER138W-A	YER138W-A	105 nt		4.34	□□□□□ -1.71
KRE9	P39005	IRC7	YFR055W	1023 nt		4.34	□□□□□ -1.71
KRE9	P39005	ERG26	YGL001C	1050 nt		4.34	□□□□□ -1.71
KRE9	P39005	HAP2	YGL237C	798 nt		4.34	□□□□□ -1.71
KRE9	P39005	PHB1	YGR132C	864 nt		4.34	□□□□□ -1.71
KRE9	P39005	YIL077C	YIL077C	963 nt		4.34	□□□□□ -1.71
KRE9	P39005	RPS5	YJR123W	678 nt		4.34	□□□□□ -1.71
KRE9	P39005	YJU3	YKL094W	942 nt		4.34	□□□□□ -1.71
KRE9	P39005	QRI5	YLR204W	336 nt		4.34	□□□□□ -1.71
KRE9	P39005	YNL042W-B	YNL042W-B	258 nt		4.34	□□□□□ -1.71
KRE9	P39005	YBL107W-A	YBL107W-A	105 nt		4.34	□□□□□ -1.71
KRE9	P39005	CKS1	YBR135W	453 nt		4.34	□□□□□ -1.71
KRE9	P39005	HSP104	YLL026W	2727 nt		4.34	□□□□□ -1.72
KRE9	P39005	EPS1	YIL005W	2106 nt		4.33	□□□□□ -1.72
KRE9	P39005	TNA1	YGR260W	1605 nt		4.33	□□□□□ -1.72
KRE9	P39005	GPA2	YER020W	1350 nt		4.33	□□□□□ -1.72
KRE9	P39005	KAR1	YNL188W	1302 nt		4.33	□□□□□ -1.72
KRE9	P39005	GRX6	YDL010W	696 nt		4.33	□□□□□ -1.72

Retrieved 100 of 7,029 protein–RNA pairs in 14.4 ms