Protein–RNA interactions for Protein: P33203

PRP40, Pre-mRNA-processing protein PRP40, yeastyeast

Known RBP Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PRP40P33203 HCR1YLR192C 798 nt7.28□□□□□ -1.24
PRP40P33203 ATP4YPL078C 735 nt7.28□□□□□ -1.24
PRP40P33203 MMR1YLR190W 1476 nt7.28□□□□□ -1.24
PRP40P33203 CMR1YDL156W 1569 nt7.28□□□□□ -1.24
PRP40P33203 NUD1YOR373W 2556 nt7.27□□□□□ -1.25
PRP40P33203 SMC5YOL034W 3282 nt7.27□□□□□ -1.25
PRP40P33203 HRQ1YDR291W 3234 nt7.27□□□□□ -1.25
PRP40P33203 YRA1YDR381W 681 nt7.27□□□□□ -1.25
PRP40P33203 SAY1YGR263C 1275 nt7.27□□□□□ -1.25
PRP40P33203 DYS1YHR068W 1164 nt7.27□□□□□ -1.25
PRP40P33203 NTG1YAL015C 1200 nt7.27□□□□□ -1.25
PRP40P33203 YKL151CYKL151C 1014 nt7.27□□□□□ -1.25
PRP40P33203 LIP2YLR239C 987 nt7.27□□□□□ -1.25
PRP40P33203 YLR285C-AYLR285C-A 171 nt7.27□□□□□ -1.25
PRP40P33203 YLR402WYLR402W 192 nt7.27□□□□□ -1.25
PRP40P33203 HRT1YOL133W 366 nt7.27□□□□□ -1.25
PRP40P33203 TAZ1YPR140W 1146 nt7.27□□□□□ -1.25
PRP40P33203 COT1YOR316C 1320 nt7.27□□□□□ -1.25
PRP40P33203 NOB1YOR056C 1380 nt7.26□□□□□ -1.25
PRP40P33203 YAP1801YHR161C 1914 nt7.26□□□□□ -1.25
PRP40P33203 ATG4YNL223W 1485 nt7.25□□□□□ -1.25
PRP40P33203 COX9YDL067C 180 nt7.25□□□□□ -1.25
PRP40P33203 DUO1YGL061C 744 nt7.25□□□□□ -1.25
PRP40P33203 MRP13YGR084C 1020 nt7.25□□□□□ -1.25
PRP40P33203 YHR070C-AYHR070C-A 411 nt7.25□□□□□ -1.25
PRP40P33203 RPL5YPL131W 894 nt7.25□□□□□ -1.25
PRP40P33203 PMT3YOR321W 2262 nt7.25□□□□□ -1.25
PRP40P33203 KAR1YNL188W 1302 nt7.25□□□□□ -1.25
PRP40P33203 QNS1YHR074W 2145 nt7.24□□□□□ -1.25
PRP40P33203 MGR3YMR115W 1506 nt7.24□□□□□ -1.25
PRP40P33203 YDL114WYDL114W 927 nt7.24□□□□□ -1.25
PRP40P33203 RRP17YDR412W 708 nt7.24□□□□□ -1.25
PRP40P33203 PHB1YGR132C 864 nt7.24□□□□□ -1.25
PRP40P33203 ERP2YAL007C 648 nt7.24□□□□□ -1.25
PRP40P33203 YOL107WYOL107W 1029 nt7.24□□□□□ -1.25
PRP40P33203 SHM1YBR263W 1473 nt7.24□□□□□ -1.25
PRP40P33203 VID30YGL227W 2877 nt7.23□□□□□ -1.25
PRP40P33203 YFL052WYFL052W 1398 nt7.23□□□□□ -1.25
PRP40P33203 CDC13YDL220C 2775 nt7.23□□□□□ -1.25
PRP40P33203 GET3YDL100C 1065 nt7.23□□□□□ -1.25
PRP40P33203 TCA17YEL048C 459 nt7.23□□□□□ -1.25
PRP40P33203 YGR068W-AYGR068W-A 96 nt7.23□□□□□ -1.25
PRP40P33203 YHR054CYHR054C 1065 nt7.23□□□□□ -1.25
PRP40P33203 DCP1YOL149W 696 nt7.23□□□□□ -1.25
PRP40P33203 NDC1YML031W 1968 nt7.22□□□□□ -1.25
PRP40P33203 PYC2YBR218C 3543 nt7.22□□□□□ -1.25
PRP40P33203 VRP1YLR337C 2454 nt7.22□□□□□ -1.25
PRP40P33203 SUF5tG(CCC)O 72 nt7.22□□□□□ -1.25
PRP40P33203 UTR4YEL038W 684 nt7.22□□□□□ -1.25
PRP40P33203 CTL1YMR180C 963 nt7.22□□□□□ -1.25
PRP40P33203 YIP3YNL044W 531 nt7.22□□□□□ -1.25
PRP40P33203 TFB4YPR056W 1017 nt7.22□□□□□ -1.25
PRP40P33203 XBP1YIL101C 1944 nt7.22□□□□□ -1.25
PRP40P33203 YTP1YNL237W 1380 nt7.21□□□□□ -1.25
PRP40P33203 SEC23YPR181C 2307 nt7.21□□□□□ -1.26
PRP40P33203 HAT2YEL056W 1206 nt7.21□□□□□ -1.26
PRP40P33203 MTG1YMR097C 1104 nt7.21□□□□□ -1.26
PRP40P33203 IRC14YOR135C 342 nt7.21□□□□□ -1.26
PRP40P33203 YPL014WYPL014W 1146 nt7.21□□□□□ -1.26
PRP40P33203 SRF1YDL133W 1314 nt7.21□□□□□ -1.26
PRP40P33203 CMK2YOL016C 1344 nt7.21□□□□□ -1.26
PRP40P33203 YNL247WYNL247W 2304 nt7.21□□□□□ -1.26
PRP40P33203 RTT106YNL206C 1368 nt7.2□□□□□ -1.26
PRP40P33203 EFM1YHL039W 1758 nt7.2□□□□□ -1.26
PRP40P33203 YDR222WYDR222W 1248 nt7.2□□□□□ -1.26
PRP40P33203 RTT103YDR289C 1230 nt7.2□□□□□ -1.26
PRP40P33203 PRO3YER023W 861 nt7.2□□□□□ -1.26
PRP40P33203 SLO1YER180C-A 258 nt7.2□□□□□ -1.26
PRP40P33203 tR(ACG)DtR(ACG)D 73 nt7.2□□□□□ -1.26
PRP40P33203 tR(ACG)EtR(ACG)E 73 nt7.2□□□□□ -1.26
PRP40P33203 tR(ACG)KtR(ACG)K 73 nt7.2□□□□□ -1.26
PRP40P33203 tR(ACG)LtR(ACG)L 73 nt7.2□□□□□ -1.26
PRP40P33203 tR(ACG)OtR(ACG)O 73 nt7.2□□□□□ -1.26
PRP40P33203 SUP19tS(UGA)E 82 nt7.2□□□□□ -1.26
PRP40P33203 SUP17tS(UGA)I 82 nt7.2□□□□□ -1.26
PRP40P33203 SUP16tS(UGA)P 82 nt7.2□□□□□ -1.26
PRP40P33203 AIR1YIL079C 1083 nt7.2□□□□□ -1.26
PRP40P33203 ATP14YLR295C 375 nt7.2□□□□□ -1.26
PRP40P33203 CDA2YLR308W 939 nt7.2□□□□□ -1.26
PRP40P33203 RPL21AYBR191W 483 nt7.2□□□□□ -1.26
PRP40P33203 AMD1YML035C 2433 nt7.2□□□□□ -1.26
PRP40P33203 CIR2YOR356W 1896 nt7.19□□□□□ -1.26
PRP40P33203 YEN1YER041W 2280 nt7.19□□□□□ -1.26
PRP40P33203 YCR097W-AYCR097W-A 267 nt7.19□□□□□ -1.26
PRP40P33203 GCV1YDR019C 1203 nt7.19□□□□□ -1.26
PRP40P33203 YEL053W-AYEL053W-A 348 nt7.19□□□□□ -1.26
PRP40P33203 YLF2YHL014C 1218 nt7.19□□□□□ -1.26
PRP40P33203 CIS3YJL158C 684 nt7.19□□□□□ -1.26
PRP40P33203 EFM3YJR129C 1020 nt7.19□□□□□ -1.26
PRP40P33203 PML1YLR016C 615 nt7.19□□□□□ -1.26
PRP40P33203 CMK1YFR014C 1341 nt7.19□□□□□ -1.26
PRP40P33203 HXT13YEL069C 1695 nt7.19□□□□□ -1.26
PRP40P33203 PDR18YNR070W 4002 nt7.18□□□□□ -1.26
PRP40P33203 BUD16YEL029C 939 nt7.18□□□□□ -1.26
PRP40P33203 SAW1YAL027W 786 nt7.18□□□□□ -1.26
PRP40P33203 GAT3YLR013W 426 nt7.18□□□□□ -1.26
PRP40P33203 SFT2YBL102W 648 nt7.18□□□□□ -1.26
PRP40P33203 ATG19YOL082W 1248 nt7.18□□□□□ -1.26
PRP40P33203 RDL1YOR285W 420 nt7.18□□□□□ -1.26
PRP40P33203 YDC1YPL087W 954 nt7.18□□□□□ -1.26
Retrieved 100 of 7,029 protein–RNA pairs in 42.7 ms