Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
UBCP0CG48 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
UBCP0CG48 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
UBCP0CG48 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
UBCP0CG48 AC093536.1-201ENST00000569153 554 ntBASIC20.5■□□□□ 0.87
UBCP0CG48 SRP68-213ENST00000629930 165 ntTSL 5 BASIC20.5■□□□□ 0.87
UBCP0CG48 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
UBCP0CG48 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
UBCP0CG48 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
UBCP0CG48 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
UBCP0CG48 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
UBCP0CG48 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
UBCP0CG48 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
UBCP0CG48 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
UBCP0CG48 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
UBCP0CG48 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC20.49■□□□□ 0.87
UBCP0CG48 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.49■□□□□ 0.87
UBCP0CG48 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
UBCP0CG48 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
UBCP0CG48 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
UBCP0CG48 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.48■□□□□ 0.87
UBCP0CG48 KRT18P10-201ENST00000388836 1287 ntBASIC20.48■□□□□ 0.87
UBCP0CG48 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.48■□□□□ 0.87
UBCP0CG48 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.48■□□□□ 0.87
UBCP0CG48 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
UBCP0CG48 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.48■□□□□ 0.87
UBCP0CG48 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
UBCP0CG48 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
UBCP0CG48 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
UBCP0CG48 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
UBCP0CG48 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
UBCP0CG48 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.47■□□□□ 0.87
UBCP0CG48 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
UBCP0CG48 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
UBCP0CG48 AC007029.1-201ENST00000604183 313 ntBASIC20.47■□□□□ 0.87
UBCP0CG48 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
UBCP0CG48 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.47■□□□□ 0.87
UBCP0CG48 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
UBCP0CG48 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
UBCP0CG48 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.47■□□□□ 0.87
UBCP0CG48 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
UBCP0CG48 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
UBCP0CG48 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
UBCP0CG48 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
UBCP0CG48 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.46■□□□□ 0.87
UBCP0CG48 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
UBCP0CG48 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.46■□□□□ 0.87
UBCP0CG48 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
UBCP0CG48 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
UBCP0CG48 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
UBCP0CG48 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.45■□□□□ 0.86
UBCP0CG48 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
UBCP0CG48 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
UBCP0CG48 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
UBCP0CG48 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.45■□□□□ 0.86
UBCP0CG48 PVT1-219ENST00000523427 938 ntTSL 3 BASIC20.45■□□□□ 0.86
UBCP0CG48 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.45■□□□□ 0.86
UBCP0CG48 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.45■□□□□ 0.86
UBCP0CG48 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
UBCP0CG48 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.44■□□□□ 0.86
UBCP0CG48 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.44■□□□□ 0.86
UBCP0CG48 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
UBCP0CG48 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.44■□□□□ 0.86
UBCP0CG48 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.44■□□□□ 0.86
UBCP0CG48 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
UBCP0CG48 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.44■□□□□ 0.86
UBCP0CG48 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
UBCP0CG48 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
UBCP0CG48 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
UBCP0CG48 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
UBCP0CG48 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
UBCP0CG48 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
UBCP0CG48 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
UBCP0CG48 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
UBCP0CG48 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
UBCP0CG48 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.43■□□□□ 0.86
UBCP0CG48 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
UBCP0CG48 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
UBCP0CG48 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.42■□□□□ 0.86
UBCP0CG48 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
UBCP0CG48 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
UBCP0CG48 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.42■□□□□ 0.86
UBCP0CG48 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.42■□□□□ 0.86
UBCP0CG48 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
UBCP0CG48 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
UBCP0CG48 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
UBCP0CG48 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.42■□□□□ 0.86
UBCP0CG48 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
UBCP0CG48 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.42■□□□□ 0.86
UBCP0CG48 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
UBCP0CG48 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.41■□□□□ 0.86
UBCP0CG48 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.41■□□□□ 0.86
UBCP0CG48 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
UBCP0CG48 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
UBCP0CG48 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
UBCP0CG48 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
UBCP0CG48 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
UBCP0CG48 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
UBCP0CG48 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.4■□□□□ 0.86
UBCP0CG48 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms