Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
CHGBP05060 AC120024.1-201ENST00000562672 995 ntBASIC28.42■■■□□ 2.14
CHGBP05060 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
CHGBP05060 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC28.41■■■□□ 2.14
CHGBP05060 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC28.41■■■□□ 2.14
CHGBP05060 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC28.41■■■□□ 2.14
CHGBP05060 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
CHGBP05060 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC28.41■■■□□ 2.14
CHGBP05060 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
CHGBP05060 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
CHGBP05060 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
CHGBP05060 AC022211.4-201ENST00000625094 2161 ntBASIC28.41■■■□□ 2.14
CHGBP05060 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC28.4■■■□□ 2.14
CHGBP05060 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
CHGBP05060 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
CHGBP05060 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
CHGBP05060 AL592295.1-201ENST00000400984 884 ntBASIC28.4■■■□□ 2.14
CHGBP05060 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
CHGBP05060 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
CHGBP05060 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC28.4■■■□□ 2.14
CHGBP05060 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
CHGBP05060 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
CHGBP05060 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC28.39■■■□□ 2.14
CHGBP05060 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
CHGBP05060 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC28.39■■■□□ 2.14
CHGBP05060 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC28.39■■■□□ 2.14
CHGBP05060 PRTG-204ENST00000561292 833 ntTSL 3 BASIC28.39■■■□□ 2.14
CHGBP05060 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC28.39■■■□□ 2.13
CHGBP05060 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC28.39■■■□□ 2.13
CHGBP05060 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
CHGBP05060 AL031848.2-201ENST00000607670 837 ntBASIC28.38■■■□□ 2.13
CHGBP05060 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC28.38■■■□□ 2.13
CHGBP05060 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC28.38■■■□□ 2.13
CHGBP05060 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
CHGBP05060 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
CHGBP05060 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC28.37■■■□□ 2.13
CHGBP05060 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC28.37■■■□□ 2.13
CHGBP05060 AC009299.2-201ENST00000482477 511 ntBASIC28.37■■■□□ 2.13
CHGBP05060 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC28.37■■■□□ 2.13
CHGBP05060 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC28.37■■■□□ 2.13
CHGBP05060 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC28.37■■■□□ 2.13
CHGBP05060 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
CHGBP05060 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
CHGBP05060 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC28.36■■■□□ 2.13
CHGBP05060 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
CHGBP05060 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC28.36■■■□□ 2.13
CHGBP05060 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
CHGBP05060 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC28.36■■■□□ 2.13
CHGBP05060 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
CHGBP05060 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
CHGBP05060 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
CHGBP05060 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
CHGBP05060 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
CHGBP05060 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC28.35■■■□□ 2.13
CHGBP05060 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC28.35■■■□□ 2.13
CHGBP05060 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
CHGBP05060 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC28.35■■■□□ 2.13
CHGBP05060 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC28.34■■■□□ 2.13
CHGBP05060 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
CHGBP05060 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC28.34■■■□□ 2.13
CHGBP05060 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
CHGBP05060 MED17-227ENST00000640521 2047 ntTSL 5 BASIC28.33■■■□□ 2.13
CHGBP05060 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
CHGBP05060 AL035685.1-201ENST00000636663 812 ntBASIC28.33■■■□□ 2.13
CHGBP05060 AC138932.3-201ENST00000567634 1902 ntBASIC28.33■■■□□ 2.13
CHGBP05060 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
CHGBP05060 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC28.33■■■□□ 2.12
CHGBP05060 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.12
CHGBP05060 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC28.32■■■□□ 2.12
CHGBP05060 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC28.32■■■□□ 2.12
CHGBP05060 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
CHGBP05060 KRT18P24-201ENST00000344739 1156 ntBASIC28.32■■■□□ 2.12
CHGBP05060 AC022616.5-201ENST00000518796 181 ntBASIC28.32■■■□□ 2.12
CHGBP05060 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
CHGBP05060 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC28.32■■■□□ 2.12
CHGBP05060 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
CHGBP05060 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
CHGBP05060 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
CHGBP05060 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC28.3■■■□□ 2.12
CHGBP05060 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC28.3■■■□□ 2.12
CHGBP05060 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
CHGBP05060 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC28.3■■■□□ 2.12
CHGBP05060 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC28.29■■■□□ 2.12
CHGBP05060 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC28.29■■■□□ 2.12
CHGBP05060 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
CHGBP05060 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC28.29■■■□□ 2.12
CHGBP05060 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC28.29■■■□□ 2.12
CHGBP05060 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC28.29■■■□□ 2.12
CHGBP05060 TK2-216ENST00000564917 1156 ntTSL 3 BASIC28.29■■■□□ 2.12
CHGBP05060 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC28.29■■■□□ 2.12
CHGBP05060 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC28.29■■■□□ 2.12
CHGBP05060 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC28.29■■■□□ 2.12
CHGBP05060 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC28.28■■■□□ 2.12
CHGBP05060 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC28.28■■■□□ 2.12
CHGBP05060 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC28.28■■■□□ 2.12
CHGBP05060 THA1P-201ENST00000590384 1145 ntBASIC28.28■■■□□ 2.12
CHGBP05060 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC28.28■■■□□ 2.12
CHGBP05060 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC28.27■■■□□ 2.12
CHGBP05060 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC28.27■■■□□ 2.12
CHGBP05060 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC28.27■■■□□ 2.12
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms