Protein–RNA interactions for Protein: P04435

TCRB, T-cell receptor beta chain V region CTL-L17, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBP04435 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TCRBP04435 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TCRBP04435 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.97■□□□□ 0.79
TCRBP04435 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TCRBP04435 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TCRBP04435 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TCRBP04435 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TCRBP04435 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TCRBP04435 MIR6090-201ENST00000622481 60 ntBASIC19.96■□□□□ 0.79
TCRBP04435 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TCRBP04435 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
TCRBP04435 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
TCRBP04435 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TCRBP04435 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
TCRBP04435 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TCRBP04435 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
TCRBP04435 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC19.95■□□□□ 0.78
TCRBP04435 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC19.95■□□□□ 0.78
TCRBP04435 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
TCRBP04435 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TCRBP04435 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TCRBP04435 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TCRBP04435 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
TCRBP04435 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.94■□□□□ 0.78
TCRBP04435 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TCRBP04435 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TCRBP04435 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TCRBP04435 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TCRBP04435 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TCRBP04435 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TCRBP04435 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.94■□□□□ 0.78
TCRBP04435 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.94■□□□□ 0.78
TCRBP04435 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TCRBP04435 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TCRBP04435 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.93■□□□□ 0.78
TCRBP04435 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TCRBP04435 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TCRBP04435 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TCRBP04435 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TCRBP04435 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
TCRBP04435 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TCRBP04435 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC19.93■□□□□ 0.78
TCRBP04435 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TCRBP04435 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.93■□□□□ 0.78
TCRBP04435 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.93■□□□□ 0.78
TCRBP04435 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
TCRBP04435 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.92■□□□□ 0.78
TCRBP04435 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TCRBP04435 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TCRBP04435 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.92■□□□□ 0.78
TCRBP04435 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TCRBP04435 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TCRBP04435 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
TCRBP04435 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.92■□□□□ 0.78
TCRBP04435 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TCRBP04435 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
TCRBP04435 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC19.91■□□□□ 0.78
TCRBP04435 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TCRBP04435 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TCRBP04435 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TCRBP04435 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TCRBP04435 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TCRBP04435 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TCRBP04435 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TCRBP04435 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TCRBP04435 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TCRBP04435 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.9■□□□□ 0.78
TCRBP04435 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.9■□□□□ 0.78
TCRBP04435 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.9■□□□□ 0.78
TCRBP04435 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TCRBP04435 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
TCRBP04435 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
TCRBP04435 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
TCRBP04435 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC19.89■□□□□ 0.77
TCRBP04435 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.89■□□□□ 0.77
TCRBP04435 CHML-205ENST00000638160 705 ntTSL 3 BASIC19.89■□□□□ 0.77
TCRBP04435 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TCRBP04435 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
TCRBP04435 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
TCRBP04435 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TCRBP04435 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC19.88■□□□□ 0.77
TCRBP04435 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TCRBP04435 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC19.88■□□□□ 0.77
TCRBP04435 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC19.88■□□□□ 0.77
TCRBP04435 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
TCRBP04435 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TCRBP04435 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
TCRBP04435 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.88■□□□□ 0.77
TCRBP04435 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TCRBP04435 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.87■□□□□ 0.77
TCRBP04435 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.87■□□□□ 0.77
TCRBP04435 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.87■□□□□ 0.77
TCRBP04435 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TCRBP04435 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TCRBP04435 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.87■□□□□ 0.77
TCRBP04435 AC137767.1-201ENST00000602918 1920 ntBASIC19.87■□□□□ 0.77
TCRBP04435 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TCRBP04435 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TCRBP04435 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TCRBP04435 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms