Protein–RNA interactions for Protein: O95562

SFT2D2, Vesicle transport protein SFT2B, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFT2D2O95562 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
SFT2D2O95562 AP006261.1-201ENST00000584783 668 ntBASIC19.43■□□□□ 0.7
SFT2D2O95562 MIR6089-201ENST00000616698 64 ntBASIC19.43■□□□□ 0.7
SFT2D2O95562 AC148477.6-201ENST00000623746 465 ntBASIC19.43■□□□□ 0.7
SFT2D2O95562 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SFT2D2O95562 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.43■□□□□ 0.7
SFT2D2O95562 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SFT2D2O95562 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SFT2D2O95562 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SFT2D2O95562 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SFT2D2O95562 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SFT2D2O95562 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SFT2D2O95562 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SFT2D2O95562 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SFT2D2O95562 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SFT2D2O95562 AC008813.1-201ENST00000536597 885 ntBASIC19.42■□□□□ 0.7
SFT2D2O95562 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SFT2D2O95562 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.42■□□□□ 0.7
SFT2D2O95562 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SFT2D2O95562 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SFT2D2O95562 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
SFT2D2O95562 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SFT2D2O95562 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.41■□□□□ 0.7
SFT2D2O95562 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
SFT2D2O95562 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SFT2D2O95562 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.41■□□□□ 0.7
SFT2D2O95562 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SFT2D2O95562 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SFT2D2O95562 CHML-204ENST00000638121 920 ntTSL 2 BASIC19.4■□□□□ 0.7
SFT2D2O95562 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SFT2D2O95562 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SFT2D2O95562 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SFT2D2O95562 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.4■□□□□ 0.7
SFT2D2O95562 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
SFT2D2O95562 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
SFT2D2O95562 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SFT2D2O95562 AC044849.2-201ENST00000606596 710 ntBASIC19.39■□□□□ 0.69
SFT2D2O95562 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SFT2D2O95562 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SFT2D2O95562 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SFT2D2O95562 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SFT2D2O95562 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SFT2D2O95562 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.39■□□□□ 0.69
SFT2D2O95562 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SFT2D2O95562 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SFT2D2O95562 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
SFT2D2O95562 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SFT2D2O95562 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SFT2D2O95562 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SFT2D2O95562 BOD1-206ENST00000480951 814 ntTSL 2 BASIC19.38■□□□□ 0.69
SFT2D2O95562 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SFT2D2O95562 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.38■□□□□ 0.69
SFT2D2O95562 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SFT2D2O95562 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SFT2D2O95562 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SFT2D2O95562 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SFT2D2O95562 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SFT2D2O95562 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.37■□□□□ 0.69
SFT2D2O95562 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SFT2D2O95562 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SFT2D2O95562 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SFT2D2O95562 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SFT2D2O95562 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SFT2D2O95562 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SFT2D2O95562 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SFT2D2O95562 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC19.36■□□□□ 0.69
SFT2D2O95562 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC19.36■□□□□ 0.69
SFT2D2O95562 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SFT2D2O95562 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.36■□□□□ 0.69
SFT2D2O95562 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SFT2D2O95562 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.36■□□□□ 0.69
SFT2D2O95562 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SFT2D2O95562 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SFT2D2O95562 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.35■□□□□ 0.69
SFT2D2O95562 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SFT2D2O95562 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
SFT2D2O95562 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
SFT2D2O95562 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SFT2D2O95562 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SFT2D2O95562 DUX4L29-201ENST00000425409 679 ntBASIC19.35■□□□□ 0.69
SFT2D2O95562 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SFT2D2O95562 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SFT2D2O95562 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SFT2D2O95562 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
SFT2D2O95562 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.35■□□□□ 0.69
SFT2D2O95562 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
SFT2D2O95562 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
SFT2D2O95562 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC19.34■□□□□ 0.69
SFT2D2O95562 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SFT2D2O95562 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SFT2D2O95562 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SFT2D2O95562 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.34■□□□□ 0.69
SFT2D2O95562 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SFT2D2O95562 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SFT2D2O95562 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SFT2D2O95562 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
SFT2D2O95562 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.34■□□□□ 0.69
SFT2D2O95562 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
SFT2D2O95562 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.33■□□□□ 0.69
SFT2D2O95562 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms