Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PFDN1O60925 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PFDN1O60925 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.11■□□□□ 0.97
PFDN1O60925 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PFDN1O60925 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PFDN1O60925 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PFDN1O60925 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PFDN1O60925 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PFDN1O60925 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PFDN1O60925 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC21.1■□□□□ 0.97
PFDN1O60925 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PFDN1O60925 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC21.1■□□□□ 0.97
PFDN1O60925 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PFDN1O60925 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
PFDN1O60925 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
PFDN1O60925 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PFDN1O60925 AC010864.1-201ENST00000609407 1511 ntBASIC21.09■□□□□ 0.97
PFDN1O60925 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
PFDN1O60925 AP004609.3-201ENST00000610705 1884 ntBASIC21.09■□□□□ 0.97
PFDN1O60925 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PFDN1O60925 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PFDN1O60925 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PFDN1O60925 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
PFDN1O60925 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
PFDN1O60925 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
PFDN1O60925 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PFDN1O60925 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PFDN1O60925 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
PFDN1O60925 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PFDN1O60925 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.08■□□□□ 0.97
PFDN1O60925 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PFDN1O60925 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
PFDN1O60925 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
PFDN1O60925 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PFDN1O60925 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
PFDN1O60925 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
PFDN1O60925 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
PFDN1O60925 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PFDN1O60925 INO80B-203ENST00000409917 796 ntTSL 2 BASIC21.07■□□□□ 0.96
PFDN1O60925 AC015813.7-201ENST00000623294 581 ntBASIC21.07■□□□□ 0.96
PFDN1O60925 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PFDN1O60925 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PFDN1O60925 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC21.07■□□□□ 0.96
PFDN1O60925 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.07■□□□□ 0.96
PFDN1O60925 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PFDN1O60925 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PFDN1O60925 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PFDN1O60925 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC21.06■□□□□ 0.96
PFDN1O60925 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PFDN1O60925 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.06■□□□□ 0.96
PFDN1O60925 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.06■□□□□ 0.96
PFDN1O60925 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.06■□□□□ 0.96
PFDN1O60925 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.06■□□□□ 0.96
PFDN1O60925 AP002414.2-202ENST00000590929 1450 ntBASIC21.06■□□□□ 0.96
PFDN1O60925 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PFDN1O60925 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
PFDN1O60925 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PFDN1O60925 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PFDN1O60925 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PFDN1O60925 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PFDN1O60925 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC21.05■□□□□ 0.96
PFDN1O60925 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
PFDN1O60925 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PFDN1O60925 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.05■□□□□ 0.96
PFDN1O60925 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PFDN1O60925 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PFDN1O60925 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PFDN1O60925 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
PFDN1O60925 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PFDN1O60925 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PFDN1O60925 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PFDN1O60925 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PFDN1O60925 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PFDN1O60925 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PFDN1O60925 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
PFDN1O60925 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.04■□□□□ 0.96
PFDN1O60925 DUSP8P3-201ENST00000399571 1760 ntBASIC21.04■□□□□ 0.96
PFDN1O60925 AC127496.7-201ENST00000625110 1798 ntBASIC21.04■□□□□ 0.96
PFDN1O60925 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PFDN1O60925 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
PFDN1O60925 FOXO3B-201ENST00000395675 1928 ntBASIC21.04■□□□□ 0.96
PFDN1O60925 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
PFDN1O60925 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PFDN1O60925 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
PFDN1O60925 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PFDN1O60925 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PFDN1O60925 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PFDN1O60925 AC010501.1-201ENST00000606270 1962 ntBASIC21.02■□□□□ 0.96
PFDN1O60925 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
PFDN1O60925 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PFDN1O60925 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
PFDN1O60925 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
PFDN1O60925 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.02■□□□□ 0.95
PFDN1O60925 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.01■□□□□ 0.95
PFDN1O60925 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PFDN1O60925 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PFDN1O60925 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PFDN1O60925 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PFDN1O60925 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PFDN1O60925 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms