Protein–RNA interactions for Protein: O60293

ZFC3H1, Zinc finger C3H1 domain-containing protein, humanhuman

Known RBP Predictions only

Length 1,989 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFC3H1O60293 CEBPA-AS1-201ENST00000592982 2198 ntBASIC23.29■■□□□ 1.32
ZFC3H1O60293 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
ZFC3H1O60293 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
ZFC3H1O60293 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
ZFC3H1O60293 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
ZFC3H1O60293 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
ZFC3H1O60293 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
ZFC3H1O60293 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
ZFC3H1O60293 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
ZFC3H1O60293 PRTG-204ENST00000561292 833 ntTSL 3 BASIC23.28■■□□□ 1.32
ZFC3H1O60293 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC23.28■■□□□ 1.32
ZFC3H1O60293 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
ZFC3H1O60293 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
ZFC3H1O60293 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC23.27■■□□□ 1.32
ZFC3H1O60293 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
ZFC3H1O60293 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
ZFC3H1O60293 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
ZFC3H1O60293 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
ZFC3H1O60293 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
ZFC3H1O60293 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC23.27■■□□□ 1.32
ZFC3H1O60293 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC23.27■■□□□ 1.32
ZFC3H1O60293 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
ZFC3H1O60293 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
ZFC3H1O60293 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC23.26■■□□□ 1.31
ZFC3H1O60293 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
ZFC3H1O60293 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC23.26■■□□□ 1.31
ZFC3H1O60293 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC23.26■■□□□ 1.31
ZFC3H1O60293 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC23.26■■□□□ 1.31
ZFC3H1O60293 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
ZFC3H1O60293 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
ZFC3H1O60293 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
ZFC3H1O60293 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
ZFC3H1O60293 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC23.25■■□□□ 1.31
ZFC3H1O60293 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
ZFC3H1O60293 HES6-204ENST00000409182 863 ntTSL 2 BASIC23.25■■□□□ 1.31
ZFC3H1O60293 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC23.25■■□□□ 1.31
ZFC3H1O60293 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
ZFC3H1O60293 Z92544.1-202ENST00000571933 1220 ntBASIC23.24■■□□□ 1.31
ZFC3H1O60293 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC23.24■■□□□ 1.31
ZFC3H1O60293 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ZFC3H1O60293 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
ZFC3H1O60293 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC23.23■■□□□ 1.31
ZFC3H1O60293 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
ZFC3H1O60293 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
ZFC3H1O60293 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
ZFC3H1O60293 GUSBP5-201ENST00000418136 578 ntBASIC23.23■■□□□ 1.31
ZFC3H1O60293 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
ZFC3H1O60293 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
ZFC3H1O60293 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC23.22■■□□□ 1.31
ZFC3H1O60293 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC23.22■■□□□ 1.31
ZFC3H1O60293 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
ZFC3H1O60293 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
ZFC3H1O60293 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC23.21■■□□□ 1.31
ZFC3H1O60293 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
ZFC3H1O60293 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
ZFC3H1O60293 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
ZFC3H1O60293 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
ZFC3H1O60293 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
ZFC3H1O60293 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
ZFC3H1O60293 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC23.21■■□□□ 1.31
ZFC3H1O60293 AL031848.2-201ENST00000607670 837 ntBASIC23.21■■□□□ 1.31
ZFC3H1O60293 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.31
ZFC3H1O60293 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC23.2■■□□□ 1.31
ZFC3H1O60293 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC23.2■■□□□ 1.3
ZFC3H1O60293 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
ZFC3H1O60293 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC23.2■■□□□ 1.3
ZFC3H1O60293 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ZFC3H1O60293 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC23.2■■□□□ 1.3
ZFC3H1O60293 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
ZFC3H1O60293 BX664725.1-201ENST00000438252 379 ntBASIC23.2■■□□□ 1.3
ZFC3H1O60293 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC23.2■■□□□ 1.3
ZFC3H1O60293 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.2■■□□□ 1.3
ZFC3H1O60293 AC131212.1-201ENST00000613771 668 ntBASIC23.2■■□□□ 1.3
ZFC3H1O60293 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC23.19■■□□□ 1.3
ZFC3H1O60293 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
ZFC3H1O60293 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC23.19■■□□□ 1.3
ZFC3H1O60293 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC23.19■■□□□ 1.3
ZFC3H1O60293 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
ZFC3H1O60293 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
ZFC3H1O60293 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ZFC3H1O60293 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ZFC3H1O60293 LONRF2P2-201ENST00000439212 571 ntBASIC23.19■■□□□ 1.3
ZFC3H1O60293 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ZFC3H1O60293 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC23.19■■□□□ 1.3
ZFC3H1O60293 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
ZFC3H1O60293 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
ZFC3H1O60293 KRT18P24-201ENST00000344739 1156 ntBASIC23.18■■□□□ 1.3
ZFC3H1O60293 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
ZFC3H1O60293 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
ZFC3H1O60293 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC23.18■■□□□ 1.3
ZFC3H1O60293 RNF146-205ENST00000477776 762 ntTSL 3 BASIC23.18■■□□□ 1.3
ZFC3H1O60293 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
ZFC3H1O60293 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ZFC3H1O60293 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
ZFC3H1O60293 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
ZFC3H1O60293 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC23.17■■□□□ 1.3
ZFC3H1O60293 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC23.17■■□□□ 1.3
ZFC3H1O60293 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC23.17■■□□□ 1.3
ZFC3H1O60293 AC011551.1-201ENST00000614101 683 ntBASIC23.17■■□□□ 1.3
ZFC3H1O60293 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms