Protein–RNA interactions for Protein: O43508

TNFSF12, Tumor necrosis factor ligand superfamily member 12, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12O43508 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TNFSF12O43508 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
TNFSF12O43508 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC19.43■□□□□ 0.7
TNFSF12O43508 AL157400.5-201ENST00000507624 621 ntBASIC19.43■□□□□ 0.7
TNFSF12O43508 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
TNFSF12O43508 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
TNFSF12O43508 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TNFSF12O43508 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TNFSF12O43508 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.43■□□□□ 0.7
TNFSF12O43508 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.43■□□□□ 0.7
TNFSF12O43508 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
TNFSF12O43508 LINC00543-201ENST00000567234 1845 ntBASIC19.42■□□□□ 0.7
TNFSF12O43508 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TNFSF12O43508 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TNFSF12O43508 MOB2-207ENST00000614710 705 ntTSL 5 BASIC19.42■□□□□ 0.7
TNFSF12O43508 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TNFSF12O43508 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TNFSF12O43508 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TNFSF12O43508 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TNFSF12O43508 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
TNFSF12O43508 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TNFSF12O43508 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC19.41■□□□□ 0.7
TNFSF12O43508 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC19.41■□□□□ 0.7
TNFSF12O43508 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
TNFSF12O43508 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TNFSF12O43508 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
TNFSF12O43508 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.41■□□□□ 0.7
TNFSF12O43508 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TNFSF12O43508 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
TNFSF12O43508 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TNFSF12O43508 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.4■□□□□ 0.7
TNFSF12O43508 PFN2-211ENST00000489155 636 ntTSL 4 BASIC19.4■□□□□ 0.7
TNFSF12O43508 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TNFSF12O43508 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TNFSF12O43508 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TNFSF12O43508 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TNFSF12O43508 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TNFSF12O43508 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TNFSF12O43508 AC133561.1-201ENST00000568600 2415 ntBASIC19.4■□□□□ 0.7
TNFSF12O43508 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
TNFSF12O43508 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TNFSF12O43508 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.39■□□□□ 0.7
TNFSF12O43508 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
TNFSF12O43508 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.39■□□□□ 0.7
TNFSF12O43508 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
TNFSF12O43508 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TNFSF12O43508 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC19.39■□□□□ 0.69
TNFSF12O43508 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TNFSF12O43508 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TNFSF12O43508 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TNFSF12O43508 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TNFSF12O43508 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TNFSF12O43508 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TNFSF12O43508 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TNFSF12O43508 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
TNFSF12O43508 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TNFSF12O43508 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.38■□□□□ 0.69
TNFSF12O43508 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TNFSF12O43508 AC025884.2-201ENST00000553429 711 ntBASIC19.38■□□□□ 0.69
TNFSF12O43508 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TNFSF12O43508 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TNFSF12O43508 MIR3960-201ENST00000583311 91 ntBASIC19.38■□□□□ 0.69
TNFSF12O43508 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TNFSF12O43508 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TNFSF12O43508 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TNFSF12O43508 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TNFSF12O43508 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TNFSF12O43508 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TNFSF12O43508 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.37■□□□□ 0.69
TNFSF12O43508 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
TNFSF12O43508 AC060814.1-201ENST00000554326 538 ntBASIC19.37■□□□□ 0.69
TNFSF12O43508 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TNFSF12O43508 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TNFSF12O43508 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TNFSF12O43508 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TNFSF12O43508 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.36■□□□□ 0.69
TNFSF12O43508 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.36■□□□□ 0.69
TNFSF12O43508 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TNFSF12O43508 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.36■□□□□ 0.69
TNFSF12O43508 SMPD5-203ENST00000639008 1464 ntBASIC19.36■□□□□ 0.69
TNFSF12O43508 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TNFSF12O43508 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC19.36■□□□□ 0.69
TNFSF12O43508 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
TNFSF12O43508 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TNFSF12O43508 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TNFSF12O43508 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TNFSF12O43508 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC19.35■□□□□ 0.69
TNFSF12O43508 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.35■□□□□ 0.69
TNFSF12O43508 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TNFSF12O43508 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC19.35■□□□□ 0.69
TNFSF12O43508 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TNFSF12O43508 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TNFSF12O43508 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC19.35■□□□□ 0.69
TNFSF12O43508 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TNFSF12O43508 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TNFSF12O43508 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
TNFSF12O43508 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TNFSF12O43508 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TNFSF12O43508 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TNFSF12O43508 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms