Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 SYT6-210ENST00000641643 1587 ntBASIC27.93■■■□□ 2.06
TMEM88BA6NKF7 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
TMEM88BA6NKF7 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC27.92■■■□□ 2.06
TMEM88BA6NKF7 PTMA-205ENST00000410064 814 ntTSL 2 BASIC27.92■■■□□ 2.06
TMEM88BA6NKF7 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC27.92■■■□□ 2.06
TMEM88BA6NKF7 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC27.91■■■□□ 2.06
TMEM88BA6NKF7 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC27.91■■■□□ 2.06
TMEM88BA6NKF7 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
TMEM88BA6NKF7 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC27.9■■■□□ 2.06
TMEM88BA6NKF7 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
TMEM88BA6NKF7 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
TMEM88BA6NKF7 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
TMEM88BA6NKF7 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
TMEM88BA6NKF7 RHOF-204ENST00000537265 699 ntTSL 2 BASIC27.9■■■□□ 2.06
TMEM88BA6NKF7 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC27.9■■■□□ 2.06
TMEM88BA6NKF7 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC27.9■■■□□ 2.06
TMEM88BA6NKF7 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC27.9■■■□□ 2.06
TMEM88BA6NKF7 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
TMEM88BA6NKF7 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
TMEM88BA6NKF7 SLC47A1P1-202ENST00000449666 945 ntBASIC27.89■■■□□ 2.06
TMEM88BA6NKF7 SP2-202ENST00000613139 908 ntTSL 5 BASIC27.89■■■□□ 2.06
TMEM88BA6NKF7 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC27.89■■■□□ 2.05
TMEM88BA6NKF7 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.05
TMEM88BA6NKF7 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.05
TMEM88BA6NKF7 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC27.88■■■□□ 2.05
TMEM88BA6NKF7 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
TMEM88BA6NKF7 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
TMEM88BA6NKF7 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC27.88■■■□□ 2.05
TMEM88BA6NKF7 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
TMEM88BA6NKF7 AC092437.1-201ENST00000624794 1048 ntBASIC27.88■■■□□ 2.05
TMEM88BA6NKF7 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
TMEM88BA6NKF7 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC27.87■■■□□ 2.05
TMEM88BA6NKF7 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC27.87■■■□□ 2.05
TMEM88BA6NKF7 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC27.87■■■□□ 2.05
TMEM88BA6NKF7 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC27.87■■■□□ 2.05
TMEM88BA6NKF7 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC27.87■■■□□ 2.05
TMEM88BA6NKF7 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC27.87■■■□□ 2.05
TMEM88BA6NKF7 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
TMEM88BA6NKF7 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC27.86■■■□□ 2.05
TMEM88BA6NKF7 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
TMEM88BA6NKF7 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
TMEM88BA6NKF7 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
TMEM88BA6NKF7 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC27.86■■■□□ 2.05
TMEM88BA6NKF7 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
TMEM88BA6NKF7 AC092171.4-201ENST00000609130 632 ntBASIC27.86■■■□□ 2.05
TMEM88BA6NKF7 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC27.85■■■□□ 2.05
TMEM88BA6NKF7 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC27.85■■■□□ 2.05
TMEM88BA6NKF7 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC27.85■■■□□ 2.05
TMEM88BA6NKF7 KRT18P5-201ENST00000436075 1291 ntBASIC27.85■■■□□ 2.05
TMEM88BA6NKF7 AC008764.7-201ENST00000593779 1081 ntBASIC27.85■■■□□ 2.05
TMEM88BA6NKF7 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC27.85■■■□□ 2.05
TMEM88BA6NKF7 AL449106.1-201ENST00000608517 1980 ntBASIC27.84■■■□□ 2.05
TMEM88BA6NKF7 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC27.84■■■□□ 2.05
TMEM88BA6NKF7 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
TMEM88BA6NKF7 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
TMEM88BA6NKF7 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
TMEM88BA6NKF7 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC27.83■■■□□ 2.05
TMEM88BA6NKF7 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC27.83■■■□□ 2.05
TMEM88BA6NKF7 BX255925.1-201ENST00000566954 1854 ntBASIC27.81■■■□□ 2.04
TMEM88BA6NKF7 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC27.81■■■□□ 2.04
TMEM88BA6NKF7 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC27.81■■■□□ 2.04
TMEM88BA6NKF7 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
TMEM88BA6NKF7 AK1-201ENST00000223836 736 ntTSL 3 BASIC27.8■■■□□ 2.04
TMEM88BA6NKF7 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
TMEM88BA6NKF7 AC004911.1-201ENST00000416316 871 ntBASIC27.8■■■□□ 2.04
TMEM88BA6NKF7 AC099791.1-201ENST00000416440 715 ntBASIC27.8■■■□□ 2.04
TMEM88BA6NKF7 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC27.8■■■□□ 2.04
TMEM88BA6NKF7 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC27.8■■■□□ 2.04
TMEM88BA6NKF7 HACD1-201ENST00000326961 773 ntTSL 2 BASIC27.79■■■□□ 2.04
TMEM88BA6NKF7 SERBP1P1-201ENST00000396021 1160 ntBASIC27.79■■■□□ 2.04
TMEM88BA6NKF7 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC27.79■■■□□ 2.04
TMEM88BA6NKF7 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC27.79■■■□□ 2.04
TMEM88BA6NKF7 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC27.79■■■□□ 2.04
TMEM88BA6NKF7 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC27.79■■■□□ 2.04
TMEM88BA6NKF7 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC27.79■■■□□ 2.04
TMEM88BA6NKF7 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC27.78■■■□□ 2.04
TMEM88BA6NKF7 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC27.78■■■□□ 2.04
TMEM88BA6NKF7 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
TMEM88BA6NKF7 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
TMEM88BA6NKF7 DLX3-202ENST00000512495 834 ntTSL 2 BASIC27.78■■■□□ 2.04
TMEM88BA6NKF7 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC27.78■■■□□ 2.04
TMEM88BA6NKF7 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC27.78■■■□□ 2.04
TMEM88BA6NKF7 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC27.78■■■□□ 2.04
TMEM88BA6NKF7 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC27.77■■■□□ 2.04
TMEM88BA6NKF7 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
TMEM88BA6NKF7 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC27.77■■■□□ 2.04
TMEM88BA6NKF7 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC27.77■■■□□ 2.04
TMEM88BA6NKF7 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC27.77■■■□□ 2.04
TMEM88BA6NKF7 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC27.77■■■□□ 2.04
TMEM88BA6NKF7 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC27.77■■■□□ 2.04
TMEM88BA6NKF7 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC27.77■■■□□ 2.04
TMEM88BA6NKF7 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC27.76■■■□□ 2.04
TMEM88BA6NKF7 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC27.76■■■□□ 2.03
TMEM88BA6NKF7 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
TMEM88BA6NKF7 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC27.76■■■□□ 2.03
TMEM88BA6NKF7 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC27.76■■■□□ 2.03
TMEM88BA6NKF7 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
TMEM88BA6NKF7 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC27.76■■■□□ 2.03
TMEM88BA6NKF7 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC27.75■■■□□ 2.03
TMEM88BA6NKF7 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC27.75■■■□□ 2.03
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms