Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TMEM235A6NFC5 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.97■□□□□ 0.79
TMEM235A6NFC5 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TMEM235A6NFC5 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.96■□□□□ 0.79
TMEM235A6NFC5 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TMEM235A6NFC5 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
TMEM235A6NFC5 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
TMEM235A6NFC5 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC19.95■□□□□ 0.78
TMEM235A6NFC5 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.95■□□□□ 0.78
TMEM235A6NFC5 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TMEM235A6NFC5 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
TMEM235A6NFC5 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TMEM235A6NFC5 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
TMEM235A6NFC5 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
TMEM235A6NFC5 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC19.94■□□□□ 0.78
TMEM235A6NFC5 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC19.94■□□□□ 0.78
TMEM235A6NFC5 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC19.94■□□□□ 0.78
TMEM235A6NFC5 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TMEM235A6NFC5 MIR6089-201ENST00000616698 64 ntBASIC19.94■□□□□ 0.78
TMEM235A6NFC5 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TMEM235A6NFC5 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
TMEM235A6NFC5 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.94■□□□□ 0.78
TMEM235A6NFC5 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC19.94■□□□□ 0.78
TMEM235A6NFC5 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TMEM235A6NFC5 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TMEM235A6NFC5 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.94■□□□□ 0.78
TMEM235A6NFC5 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.93■□□□□ 0.78
TMEM235A6NFC5 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TMEM235A6NFC5 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TMEM235A6NFC5 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TMEM235A6NFC5 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TMEM235A6NFC5 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TMEM235A6NFC5 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TMEM235A6NFC5 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TMEM235A6NFC5 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TMEM235A6NFC5 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.92■□□□□ 0.78
TMEM235A6NFC5 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TMEM235A6NFC5 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TMEM235A6NFC5 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TMEM235A6NFC5 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC19.92■□□□□ 0.78
TMEM235A6NFC5 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.92■□□□□ 0.78
TMEM235A6NFC5 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TMEM235A6NFC5 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TMEM235A6NFC5 C9orf163-202ENST00000624034 2573 ntBASIC19.91■□□□□ 0.78
TMEM235A6NFC5 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TMEM235A6NFC5 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TMEM235A6NFC5 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TMEM235A6NFC5 AC079834.2-201ENST00000609776 1949 ntBASIC19.91■□□□□ 0.78
TMEM235A6NFC5 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.91■□□□□ 0.78
TMEM235A6NFC5 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TMEM235A6NFC5 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TMEM235A6NFC5 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TMEM235A6NFC5 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TMEM235A6NFC5 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TMEM235A6NFC5 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TMEM235A6NFC5 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TMEM235A6NFC5 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.9■□□□□ 0.78
TMEM235A6NFC5 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TMEM235A6NFC5 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.9■□□□□ 0.78
TMEM235A6NFC5 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
TMEM235A6NFC5 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TMEM235A6NFC5 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TMEM235A6NFC5 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC19.89■□□□□ 0.77
TMEM235A6NFC5 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
TMEM235A6NFC5 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
TMEM235A6NFC5 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TMEM235A6NFC5 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TMEM235A6NFC5 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TMEM235A6NFC5 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TMEM235A6NFC5 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC19.88■□□□□ 0.77
TMEM235A6NFC5 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
TMEM235A6NFC5 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TMEM235A6NFC5 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TMEM235A6NFC5 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TMEM235A6NFC5 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TMEM235A6NFC5 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TMEM235A6NFC5 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
TMEM235A6NFC5 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TMEM235A6NFC5 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TMEM235A6NFC5 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TMEM235A6NFC5 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.87■□□□□ 0.77
TMEM235A6NFC5 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TMEM235A6NFC5 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TMEM235A6NFC5 RPS2P35-201ENST00000443417 897 ntBASIC19.87■□□□□ 0.77
TMEM235A6NFC5 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TMEM235A6NFC5 RNF166-209ENST00000567844 633 ntTSL 5 BASIC19.87■□□□□ 0.77
TMEM235A6NFC5 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TMEM235A6NFC5 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TMEM235A6NFC5 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TMEM235A6NFC5 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
TMEM235A6NFC5 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TMEM235A6NFC5 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TMEM235A6NFC5 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
TMEM235A6NFC5 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TMEM235A6NFC5 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TMEM235A6NFC5 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TMEM235A6NFC5 AGPS-202ENST00000409888 815 ntTSL 4 BASIC19.86■□□□□ 0.77
TMEM235A6NFC5 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC19.86■□□□□ 0.77
TMEM235A6NFC5 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TMEM235A6NFC5 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms