Protein–RNA interactions for Protein: A0A0B4J274

TRAV20, T-cell receptor alpha variable 20 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV20A0A0B4J274 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.78■□□□□ 0.76
TRAV20A0A0B4J274 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV20A0A0B4J274 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV20A0A0B4J274 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.77■□□□□ 0.76
TRAV20A0A0B4J274 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRAV20A0A0B4J274 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRAV20A0A0B4J274 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
TRAV20A0A0B4J274 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRAV20A0A0B4J274 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.77■□□□□ 0.76
TRAV20A0A0B4J274 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
TRAV20A0A0B4J274 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
TRAV20A0A0B4J274 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
TRAV20A0A0B4J274 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV20A0A0B4J274 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC19.76■□□□□ 0.75
TRAV20A0A0B4J274 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
TRAV20A0A0B4J274 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV20A0A0B4J274 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV20A0A0B4J274 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV20A0A0B4J274 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV20A0A0B4J274 KRT125P-201ENST00000546827 989 ntBASIC19.76■□□□□ 0.75
TRAV20A0A0B4J274 THA1P-201ENST00000590384 1145 ntBASIC19.76■□□□□ 0.75
TRAV20A0A0B4J274 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV20A0A0B4J274 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC19.76■□□□□ 0.75
TRAV20A0A0B4J274 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV20A0A0B4J274 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV20A0A0B4J274 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV20A0A0B4J274 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV20A0A0B4J274 AP004609.3-201ENST00000610705 1884 ntBASIC19.75■□□□□ 0.75
TRAV20A0A0B4J274 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC19.75■□□□□ 0.75
TRAV20A0A0B4J274 KRT18P24-201ENST00000344739 1156 ntBASIC19.75■□□□□ 0.75
TRAV20A0A0B4J274 BX664725.1-201ENST00000438252 379 ntBASIC19.75■□□□□ 0.75
TRAV20A0A0B4J274 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
TRAV20A0A0B4J274 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV20A0A0B4J274 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV20A0A0B4J274 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV20A0A0B4J274 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV20A0A0B4J274 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV20A0A0B4J274 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
TRAV20A0A0B4J274 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV20A0A0B4J274 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.74■□□□□ 0.75
TRAV20A0A0B4J274 AL356441.2-201ENST00000443009 864 ntBASIC19.74■□□□□ 0.75
TRAV20A0A0B4J274 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV20A0A0B4J274 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV20A0A0B4J274 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.74■□□□□ 0.75
TRAV20A0A0B4J274 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV20A0A0B4J274 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV20A0A0B4J274 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
TRAV20A0A0B4J274 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.73■□□□□ 0.75
TRAV20A0A0B4J274 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
TRAV20A0A0B4J274 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.73■□□□□ 0.75
TRAV20A0A0B4J274 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV20A0A0B4J274 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.73■□□□□ 0.75
TRAV20A0A0B4J274 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV20A0A0B4J274 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV20A0A0B4J274 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV20A0A0B4J274 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV20A0A0B4J274 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV20A0A0B4J274 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV20A0A0B4J274 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV20A0A0B4J274 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
TRAV20A0A0B4J274 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.72■□□□□ 0.75
TRAV20A0A0B4J274 SHF-208ENST00000560734 1731 ntTSL 3 BASIC19.72■□□□□ 0.75
TRAV20A0A0B4J274 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.72■□□□□ 0.75
TRAV20A0A0B4J274 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC19.72■□□□□ 0.75
TRAV20A0A0B4J274 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.72■□□□□ 0.75
TRAV20A0A0B4J274 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.72■□□□□ 0.75
TRAV20A0A0B4J274 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV20A0A0B4J274 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV20A0A0B4J274 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV20A0A0B4J274 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV20A0A0B4J274 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC19.71■□□□□ 0.75
TRAV20A0A0B4J274 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.71■□□□□ 0.75
TRAV20A0A0B4J274 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
TRAV20A0A0B4J274 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
TRAV20A0A0B4J274 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC19.71■□□□□ 0.75
TRAV20A0A0B4J274 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV20A0A0B4J274 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV20A0A0B4J274 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC19.7■□□□□ 0.74
TRAV20A0A0B4J274 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRAV20A0A0B4J274 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.7■□□□□ 0.74
TRAV20A0A0B4J274 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRAV20A0A0B4J274 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRAV20A0A0B4J274 AL592295.1-201ENST00000400984 884 ntBASIC19.7■□□□□ 0.74
TRAV20A0A0B4J274 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
TRAV20A0A0B4J274 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRAV20A0A0B4J274 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
TRAV20A0A0B4J274 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRAV20A0A0B4J274 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRAV20A0A0B4J274 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.69■□□□□ 0.74
TRAV20A0A0B4J274 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRAV20A0A0B4J274 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRAV20A0A0B4J274 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRAV20A0A0B4J274 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRAV20A0A0B4J274 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAV20A0A0B4J274 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAV20A0A0B4J274 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAV20A0A0B4J274 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAV20A0A0B4J274 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC19.68■□□□□ 0.74
TRAV20A0A0B4J274 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAV20A0A0B4J274 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms