Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC16.47■□□□□ 0.23
TRAV12-1A0A0B4J245 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV12-1A0A0B4J245 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV12-1A0A0B4J245 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV12-1A0A0B4J245 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV12-1A0A0B4J245 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
TRAV12-1A0A0B4J245 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV12-1A0A0B4J245 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
TRAV12-1A0A0B4J245 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
TRAV12-1A0A0B4J245 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC16.46■□□□□ 0.23
TRAV12-1A0A0B4J245 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV12-1A0A0B4J245 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC16.46■□□□□ 0.23
TRAV12-1A0A0B4J245 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
TRAV12-1A0A0B4J245 CAHM-201ENST00000604200 896 ntBASIC16.46■□□□□ 0.23
TRAV12-1A0A0B4J245 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV12-1A0A0B4J245 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV12-1A0A0B4J245 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV12-1A0A0B4J245 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
TRAV12-1A0A0B4J245 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC16.46■□□□□ 0.23
TRAV12-1A0A0B4J245 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
TRAV12-1A0A0B4J245 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
TRAV12-1A0A0B4J245 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
TRAV12-1A0A0B4J245 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC16.45■□□□□ 0.22
TRAV12-1A0A0B4J245 STK25-234ENST00000535007 2459 ntTSL 2 BASIC16.45■□□□□ 0.22
TRAV12-1A0A0B4J245 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV12-1A0A0B4J245 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC16.45■□□□□ 0.22
TRAV12-1A0A0B4J245 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV12-1A0A0B4J245 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TRAV12-1A0A0B4J245 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
TRAV12-1A0A0B4J245 EP400NL-214ENST00000641289 2402 ntBASIC16.45■□□□□ 0.22
TRAV12-1A0A0B4J245 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV12-1A0A0B4J245 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV12-1A0A0B4J245 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
TRAV12-1A0A0B4J245 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV12-1A0A0B4J245 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC16.45■□□□□ 0.22
TRAV12-1A0A0B4J245 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC16.45■□□□□ 0.22
TRAV12-1A0A0B4J245 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV12-1A0A0B4J245 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV12-1A0A0B4J245 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV12-1A0A0B4J245 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV12-1A0A0B4J245 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV12-1A0A0B4J245 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC16.44■□□□□ 0.22
TRAV12-1A0A0B4J245 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV12-1A0A0B4J245 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV12-1A0A0B4J245 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC16.44■□□□□ 0.22
TRAV12-1A0A0B4J245 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC16.44■□□□□ 0.22
TRAV12-1A0A0B4J245 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV12-1A0A0B4J245 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV12-1A0A0B4J245 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV12-1A0A0B4J245 AC127496.7-201ENST00000625110 1798 ntBASIC16.43■□□□□ 0.22
TRAV12-1A0A0B4J245 AC137767.1-201ENST00000602918 1920 ntBASIC16.43■□□□□ 0.22
TRAV12-1A0A0B4J245 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV12-1A0A0B4J245 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV12-1A0A0B4J245 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TRAV12-1A0A0B4J245 MIR6090-201ENST00000622481 60 ntBASIC16.43■□□□□ 0.22
TRAV12-1A0A0B4J245 CHML-205ENST00000638160 705 ntTSL 3 BASIC16.43■□□□□ 0.22
TRAV12-1A0A0B4J245 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV12-1A0A0B4J245 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC16.43■□□□□ 0.22
TRAV12-1A0A0B4J245 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
TRAV12-1A0A0B4J245 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC16.43■□□□□ 0.22
TRAV12-1A0A0B4J245 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC16.42■□□□□ 0.22
TRAV12-1A0A0B4J245 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
TRAV12-1A0A0B4J245 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV12-1A0A0B4J245 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC16.42■□□□□ 0.22
TRAV12-1A0A0B4J245 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV12-1A0A0B4J245 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC16.42■□□□□ 0.22
TRAV12-1A0A0B4J245 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV12-1A0A0B4J245 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV12-1A0A0B4J245 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC16.42■□□□□ 0.22
TRAV12-1A0A0B4J245 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
TRAV12-1A0A0B4J245 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV12-1A0A0B4J245 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV12-1A0A0B4J245 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
TRAV12-1A0A0B4J245 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC16.41■□□□□ 0.22
TRAV12-1A0A0B4J245 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV12-1A0A0B4J245 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV12-1A0A0B4J245 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC16.41■□□□□ 0.22
TRAV12-1A0A0B4J245 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV12-1A0A0B4J245 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV12-1A0A0B4J245 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
TRAV12-1A0A0B4J245 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV12-1A0A0B4J245 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV12-1A0A0B4J245 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV12-1A0A0B4J245 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC16.4■□□□□ 0.22
TRAV12-1A0A0B4J245 RPS2-210ENST00000530225 765 ntTSL 2 BASIC16.4■□□□□ 0.22
TRAV12-1A0A0B4J245 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV12-1A0A0B4J245 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV12-1A0A0B4J245 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
TRAV12-1A0A0B4J245 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
TRAV12-1A0A0B4J245 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV12-1A0A0B4J245 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV12-1A0A0B4J245 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
TRAV12-1A0A0B4J245 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC16.39■□□□□ 0.22
TRAV12-1A0A0B4J245 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV12-1A0A0B4J245 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC16.39■□□□□ 0.21
TRAV12-1A0A0B4J245 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC16.39■□□□□ 0.21
TRAV12-1A0A0B4J245 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV12-1A0A0B4J245 LINC00526-201ENST00000581067 1875 ntBASIC16.39■□□□□ 0.21
TRAV12-1A0A0B4J245 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV12-1A0A0B4J245 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms