Protein–RNA interactions for Protein: Q08961

RKM1, Ribosomal lysine N-methyltransferase 1, yeastyeast

Predicted RBP Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RKM1Q08961 CCT6YDR188W 1641 nt11.38□□□□□ -0.59
RKM1Q08961 RTF1YGL244W 1677 nt11.34□□□□□ -0.59
RKM1Q08961 SIS1YNL007C 1059 nt11.33□□□□□ -0.6
RKM1Q08961 YSC84YHR016C 1407 nt11.3□□□□□ -0.6
RKM1Q08961 YFL021C-AYFL021C-A 855 nt11.29□□□□□ -0.6
RKM1Q08961 SHU1YHL006C 453 nt11.28□□□□□ -0.6
RKM1Q08961 YJL225CYJL225C 5277 nt11.27□□□□□ -0.61
RKM1Q08961 IRC15YPL017C 1500 nt11.27□□□□□ -0.61
RKM1Q08961 BOR1YNL275W 1731 nt11.26□□□□□ -0.61
RKM1Q08961 YGR021WYGR021W 873 nt11.26□□□□□ -0.61
RKM1Q08961 SUF2tP(AGG)C 72 nt11.26□□□□□ -0.61
RKM1Q08961 SUF10tP(AGG)N 72 nt11.26□□□□□ -0.61
RKM1Q08961 HOM6YJR139C 1080 nt11.24□□□□□ -0.61
RKM1Q08961 GIS3YLR094C 1509 nt11.22□□□□□ -0.61
RKM1Q08961 BOP3YNL042W 1191 nt11.2□□□□□ -0.62
RKM1Q08961 YHL050CYHL050C 2094 nt11.18□□□□□ -0.62
RKM1Q08961 YAL037C-BYAL037C-B 975 nt11.18□□□□□ -0.62
RKM1Q08961 YKL097CYKL097C 411 nt11.18□□□□□ -0.62
RKM1Q08961 GFD2YCL036W 1701 nt11.17□□□□□ -0.62
RKM1Q08961 ART5YGR068C 1761 nt11.16□□□□□ -0.62
RKM1Q08961 PTK1YKL198C 1989 nt11.15□□□□□ -0.62
RKM1Q08961 MNP1YGL068W 585 nt11.1□□□□□ -0.63
RKM1Q08961 PET9YBL030C 957 nt11.08□□□□□ -0.64
RKM1Q08961 RKM5YLR137W 1104 nt11.06□□□□□ -0.64
RKM1Q08961 RTS2YOR077W 699 nt11.03□□□□□ -0.64
RKM1Q08961 RRT12YCR045C 1476 nt11.02□□□□□ -0.65
RKM1Q08961 TIR4YOR009W 1464 nt11.01□□□□□ -0.65
RKM1Q08961 YCH1YGR203W 447 nt11□□□□□ -0.65
RKM1Q08961 MOT3YMR070W 1473 nt11□□□□□ -0.65
RKM1Q08961 CUE1YMR264W 612 nt10.97□□□□□ -0.65
RKM1Q08961 MCH5YOR306C 1566 nt10.95□□□□□ -0.66
RKM1Q08961 YNL195CYNL195C 786 nt10.95□□□□□ -0.66
RKM1Q08961 YFL054CYFL054C 1941 nt10.92□□□□□ -0.66
RKM1Q08961 NPL3YDR432W 1245 nt10.9□□□□□ -0.66
RKM1Q08961 YMR057CYMR057C 372 nt10.9□□□□□ -0.66
RKM1Q08961 SPT8YLR055C 1809 nt10.88□□□□□ -0.67
RKM1Q08961 ALG12YNR030W 1656 nt10.83□□□□□ -0.68
RKM1Q08961 NCP1YHR042W 2076 nt10.82□□□□□ -0.68
RKM1Q08961 HSP60YLR259C 1719 nt10.79□□□□□ -0.68
RKM1Q08961 YLR154C-GYLR154C-G 150 nt10.79□□□□□ -0.68
RKM1Q08961 YIL100WYIL100W 354 nt10.78□□□□□ -0.68
RKM1Q08961 YOL037CYOL037C 354 nt10.78□□□□□ -0.68
RKM1Q08961 YLR236CYLR236C 324 nt10.74□□□□□ -0.69
RKM1Q08961 RPM1RPM1 483 nt10.72□□□□□ -0.69
RKM1Q08961 YJL152WYJL152W 360 nt10.71□□□□□ -0.69
RKM1Q08961 RDN37-1RDN37-1 5354 nt10.66□□□□□ -0.7
RKM1Q08961 RDN37-2RDN37-2 5354 nt10.66□□□□□ -0.7
RKM1Q08961 YOR139CYOR139C 393 nt10.66□□□□□ -0.7
RKM1Q08961 YCL048W-AYCL048W-A 240 nt10.65□□□□□ -0.7
RKM1Q08961 SWE1YJL187C 2460 nt10.61□□□□□ -0.71
RKM1Q08961 GLK1YCL040W 1503 nt10.6□□□□□ -0.71
RKM1Q08961 WHI5YOR083W 888 nt10.58□□□□□ -0.72
RKM1Q08961 YLR281CYLR281C 468 nt10.57□□□□□ -0.72
RKM1Q08961 RRD1YIL153W 1182 nt10.52□□□□□ -0.73
RKM1Q08961 NAR1YNL240C 1476 nt10.52□□□□□ -0.73
RKM1Q08961 LCB1YMR296C 1677 nt10.5□□□□□ -0.73
RKM1Q08961 DSK2YMR276W 1122 nt10.48□□□□□ -0.73
RKM1Q08961 DED1YOR204W 1815 nt10.45□□□□□ -0.74
RKM1Q08961 IDH1YNL037C 1083 nt10.45□□□□□ -0.74
RKM1Q08961 FMP52YER004W 696 nt10.43□□□□□ -0.74
RKM1Q08961 GBP2YCL011C 1284 nt10.42□□□□□ -0.74
RKM1Q08961 FMT1YBL013W 1206 nt10.39□□□□□ -0.75
RKM1Q08961 AAC1YMR056C 930 nt10.39□□□□□ -0.75
RKM1Q08961 FUR4YBR021W 1902 nt10.38□□□□□ -0.75
RKM1Q08961 PCM1YEL058W 1674 nt10.37□□□□□ -0.75
RKM1Q08961 TCD2YKL027W 1344 nt10.36□□□□□ -0.75
RKM1Q08961 IMP2'YIL154C 1041 nt10.34□□□□□ -0.75
RKM1Q08961 PRP4YPR178W 1398 nt10.34□□□□□ -0.75
RKM1Q08961 PUS2YGL063W 1113 nt10.33□□□□□ -0.76
RKM1Q08961 LYS4YDR234W 2082 nt10.32□□□□□ -0.76
RKM1Q08961 SIM1YIL123W 1431 nt10.3□□□□□ -0.76
RKM1Q08961 YEL076C-AYEL076C-A 651 nt10.29□□□□□ -0.76
RKM1Q08961 YEL076CYEL076C 651 nt10.29□□□□□ -0.76
RKM1Q08961 YLR464WYLR464W 651 nt10.29□□□□□ -0.76
RKM1Q08961 BIO4YNR057C 714 nt10.29□□□□□ -0.76
RKM1Q08961 YPR011CYPR011C 981 nt10.29□□□□□ -0.76
RKM1Q08961 ADH2YMR303C 1047 nt10.28□□□□□ -0.76
RKM1Q08961 DPS1YLL018C 1674 nt10.28□□□□□ -0.76
RKM1Q08961 tM(CAU)CtM(CAU)C 72 nt10.27□□□□□ -0.77
RKM1Q08961 IMT4tM(CAU)E 72 nt10.27□□□□□ -0.77
RKM1Q08961 IMT3tM(CAU)J3 72 nt10.27□□□□□ -0.77
RKM1Q08961 IMT1tM(CAU)O1 72 nt10.27□□□□□ -0.77
RKM1Q08961 IMT2tM(CAU)P 72 nt10.27□□□□□ -0.77
RKM1Q08961 CMP2YML057W 1815 nt10.26□□□□□ -0.77
RKM1Q08961 SOR2YDL246C 1074 nt10.25□□□□□ -0.77
RKM1Q08961 SOR1YJR159W 1074 nt10.25□□□□□ -0.77
RKM1Q08961 FMP45YDL222C 930 nt10.24□□□□□ -0.77
RKM1Q08961 CYT2YKL087C 675 nt10.24□□□□□ -0.77
RKM1Q08961 CWP1YKL096W 720 nt10.24□□□□□ -0.77
RKM1Q08961 SNF6YHL025W 999 nt10.23□□□□□ -0.77
RKM1Q08961 MXR2YCL033C 507 nt10.23□□□□□ -0.77
RKM1Q08961 BIO5YNR056C 1686 nt10.22□□□□□ -0.77
RKM1Q08961 YDR433WYDR433W 441 nt10.22□□□□□ -0.77
RKM1Q08961 PBP1YGR178C 2169 nt10.21□□□□□ -0.78
RKM1Q08961 ERV46YAL042W 1248 nt10.2□□□□□ -0.78
RKM1Q08961 BMT6YLR063W 1098 nt10.2□□□□□ -0.78
RKM1Q08961 YIH1YCR059C 777 nt10.15□□□□□ -0.78
RKM1Q08961 LPX1YOR084W 1164 nt10.14□□□□□ -0.79
RKM1Q08961 FRD1YEL047C 1413 nt10.14□□□□□ -0.79
RKM1Q08961 YKR040CYKR040C 504 nt10.13□□□□□ -0.79
Retrieved 100 of 7,029 protein–RNA pairs in 16.9 ms