Protein–RNA interactions for Protein: Q08949

DDC1, DNA damage checkpoint protein 1, yeastyeast

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DDC1Q08949 SIS1YNL007C 1059 nt12.82□□□□□ -0.36
DDC1Q08949 MEP2YNL142W 1500 nt12.78□□□□□ -0.36
DDC1Q08949 DSK2YMR276W 1122 nt12.73□□□□□ -0.37
DDC1Q08949 RPP2AYOL039W 321 nt12.72□□□□□ -0.37
DDC1Q08949 YLR236CYLR236C 324 nt12.71□□□□□ -0.37
DDC1Q08949 YPR011CYPR011C 981 nt12.71□□□□□ -0.37
DDC1Q08949 IMP2'YIL154C 1041 nt12.7□□□□□ -0.38
DDC1Q08949 PTP1YDL230W 1008 nt12.68□□□□□ -0.38
DDC1Q08949 YJL152WYJL152W 360 nt12.68□□□□□ -0.38
DDC1Q08949 TIR4YOR009W 1464 nt12.66□□□□□ -0.38
DDC1Q08949 YCH1YGR203W 447 nt12.65□□□□□ -0.38
DDC1Q08949 MOT3YMR070W 1473 nt12.63□□□□□ -0.39
DDC1Q08949 FMP45YDL222C 930 nt12.62□□□□□ -0.39
DDC1Q08949 ART5YGR068C 1761 nt12.59□□□□□ -0.39
DDC1Q08949 DCW1YKL046C 1350 nt12.58□□□□□ -0.4
DDC1Q08949 PET9YBL030C 957 nt12.54□□□□□ -0.4
DDC1Q08949 GFD2YCL036W 1701 nt12.54□□□□□ -0.4
DDC1Q08949 IDH1YNL037C 1083 nt12.53□□□□□ -0.4
DDC1Q08949 CAC2YML102W 1407 nt12.53□□□□□ -0.4
DDC1Q08949 YMR057CYMR057C 372 nt12.47□□□□□ -0.41
DDC1Q08949 LPX1YOR084W 1164 nt12.47□□□□□ -0.41
DDC1Q08949 ERV46YAL042W 1248 nt12.46□□□□□ -0.41
DDC1Q08949 EMI2YDR516C 1503 nt12.42□□□□□ -0.42
DDC1Q08949 GBP2YCL011C 1284 nt12.41□□□□□ -0.42
DDC1Q08949 YDR433WYDR433W 441 nt12.39□□□□□ -0.43
DDC1Q08949 YCL048W-AYCL048W-A 240 nt12.39□□□□□ -0.43
DDC1Q08949 YDL221WYDL221W 552 nt12.37□□□□□ -0.43
DDC1Q08949 IRC15YPL017C 1500 nt12.36□□□□□ -0.43
DDC1Q08949 RTS2YOR077W 699 nt12.35□□□□□ -0.43
DDC1Q08949 SSA4YER103W 1929 nt12.33□□□□□ -0.44
DDC1Q08949 FPS1YLL043W 2010 nt12.32□□□□□ -0.44
DDC1Q08949 YKR040CYKR040C 504 nt12.32□□□□□ -0.44
DDC1Q08949 MXR2YCL033C 507 nt12.3□□□□□ -0.44
DDC1Q08949 YMR090WYMR090W 684 nt12.29□□□□□ -0.44
DDC1Q08949 SPP1YPL138C 1062 nt12.28□□□□□ -0.44
DDC1Q08949 CUE1YMR264W 612 nt12.25□□□□□ -0.45
DDC1Q08949 TCD2YKL027W 1344 nt12.25□□□□□ -0.45
DDC1Q08949 GIS3YLR094C 1509 nt12.24□□□□□ -0.45
DDC1Q08949 DED1YOR204W 1815 nt12.21□□□□□ -0.45
DDC1Q08949 RRD1YIL153W 1182 nt12.21□□□□□ -0.45
DDC1Q08949 MRPL8YJL063C 717 nt12.19□□□□□ -0.46
DDC1Q08949 SDH1YKL148C 1923 nt12.18□□□□□ -0.46
DDC1Q08949 YBR220CYBR220C 1683 nt12.15□□□□□ -0.46
DDC1Q08949 SCC4YER147C 1875 nt12.13□□□□□ -0.47
DDC1Q08949 RTG1YOL067C 534 nt12.12□□□□□ -0.47
DDC1Q08949 FRD1YEL047C 1413 nt12.11□□□□□ -0.47
DDC1Q08949 YEL076C-AYEL076C-A 651 nt12.08□□□□□ -0.48
DDC1Q08949 YEL076CYEL076C 651 nt12.08□□□□□ -0.48
DDC1Q08949 YLR464WYLR464W 651 nt12.08□□□□□ -0.48
DDC1Q08949 FMT1YBL013W 1206 nt12.08□□□□□ -0.48
DDC1Q08949 YIL100WYIL100W 354 nt12.06□□□□□ -0.48
DDC1Q08949 SOR2YDL246C 1074 nt12.04□□□□□ -0.48
DDC1Q08949 SOR1YJR159W 1074 nt12.04□□□□□ -0.48
DDC1Q08949 ADO1YJR105W 1023 nt12.03□□□□□ -0.48
DDC1Q08949 FMP52YER004W 696 nt12.01□□□□□ -0.49
DDC1Q08949 YCL042WYCL042W 360 nt12□□□□□ -0.49
DDC1Q08949 PTH1YHR189W 573 nt11.91□□□□□ -0.5
DDC1Q08949 CWP1YKL096W 720 nt11.91□□□□□ -0.5
DDC1Q08949 ADH2YMR303C 1047 nt11.89□□□□□ -0.51
DDC1Q08949 YLR235CYLR235C 399 nt11.86□□□□□ -0.51
DDC1Q08949 HUA1YGR268C 597 nt11.85□□□□□ -0.51
DDC1Q08949 PCM1YEL058W 1674 nt11.84□□□□□ -0.51
DDC1Q08949 BDF1YLR399C 2061 nt11.83□□□□□ -0.51
DDC1Q08949 YNL195CYNL195C 786 nt11.83□□□□□ -0.52
DDC1Q08949 YKL030WYKL030W 606 nt11.82□□□□□ -0.52
DDC1Q08949 RRT12YCR045C 1476 nt11.81□□□□□ -0.52
DDC1Q08949 YSC84YHR016C 1407 nt11.8□□□□□ -0.52
DDC1Q08949 SNF6YHL025W 999 nt11.79□□□□□ -0.52
DDC1Q08949 LCB1YMR296C 1677 nt11.78□□□□□ -0.52
DDC1Q08949 YHL050CYHL050C 2094 nt11.77□□□□□ -0.52
DDC1Q08949 DIC1YLR348C 897 nt11.75□□□□□ -0.53
DDC1Q08949 UBX6YJL048C 1191 nt11.74□□□□□ -0.53
DDC1Q08949 YIH1YCR059C 777 nt11.7□□□□□ -0.54
DDC1Q08949 TAT1YBR069C 1860 nt11.7□□□□□ -0.54
DDC1Q08949 TIM23YNR017W 669 nt11.69□□□□□ -0.54
DDC1Q08949 RNQ1YCL028W 1218 nt11.69□□□□□ -0.54
DDC1Q08949 SEC11YIR022W 504 nt11.67□□□□□ -0.54
DDC1Q08949 YDR094WYDR094W 336 nt11.64□□□□□ -0.55
DDC1Q08949 BIO4YNR057C 714 nt11.62□□□□□ -0.55
DDC1Q08949 YLR179CYLR179C 606 nt11.61□□□□□ -0.55
DDC1Q08949 SIM1YIL123W 1431 nt11.59□□□□□ -0.55
DDC1Q08949 PCH2YBR186W 1695 nt11.57□□□□□ -0.56
DDC1Q08949 YLL053CYLL053C 459 nt11.57□□□□□ -0.56
DDC1Q08949 WSC2YNL283C 1512 nt11.55□□□□□ -0.56
DDC1Q08949 tL(GAG)GtL(GAG)G 82 nt11.54□□□□□ -0.56
DDC1Q08949 AHT1YHR093W 549 nt11.53□□□□□ -0.56
DDC1Q08949 YPR064WYPR064W 420 nt11.53□□□□□ -0.56
DDC1Q08949 FTR1YER145C 1215 nt11.52□□□□□ -0.57
DDC1Q08949 GUT2YIL155C 1950 nt11.5□□□□□ -0.57
DDC1Q08949 TAD3YLR316C 969 nt11.48□□□□□ -0.57
DDC1Q08949 AQY1YPR192W 918 nt11.48□□□□□ -0.57
DDC1Q08949 GAL1YBR020W 1587 nt11.48□□□□□ -0.57
DDC1Q08949 NCP1YHR042W 2076 nt11.48□□□□□ -0.57
DDC1Q08949 TRM5YHR070W 1500 nt11.44□□□□□ -0.58
DDC1Q08949 YFR018CYFR018C 1092 nt11.43□□□□□ -0.58
DDC1Q08949 PAC11YDR488C 1602 nt11.42□□□□□ -0.58
DDC1Q08949 NVJ2YPR091C 2313 nt11.42□□□□□ -0.58
DDC1Q08949 ERF2YLR246W 1080 nt11.41□□□□□ -0.58
DDC1Q08949 ATF2YGR177C 1608 nt11.4□□□□□ -0.58
DDC1Q08949 YFL015W-AYFL015W-A 318 nt11.39□□□□□ -0.59
Retrieved 100 of 7,029 protein–RNA pairs in 14.1 ms