Protein–RNA interactions for Protein: Q07468

VAM6, Vacuolar morphogenesis protein 6, yeastyeast

Predictions only

Length 1,049 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VAM6Q07468 NPL3YDR432W 1245 nt12.22□□□□□ -0.45
VAM6Q07468 SIS1YNL007C 1059 nt12.21□□□□□ -0.45
VAM6Q07468 PTP1YDL230W 1008 nt12.2□□□□□ -0.46
VAM6Q07468 CAC2YML102W 1407 nt12.11□□□□□ -0.47
VAM6Q07468 EMI2YDR516C 1503 nt12.11□□□□□ -0.47
VAM6Q07468 MOT3YMR070W 1473 nt12.06□□□□□ -0.48
VAM6Q07468 ART5YGR068C 1761 nt12.05□□□□□ -0.48
VAM6Q07468 YDL221WYDL221W 552 nt12.03□□□□□ -0.48
VAM6Q07468 YMR090WYMR090W 684 nt12.02□□□□□ -0.49
VAM6Q07468 GFD2YCL036W 1701 nt12□□□□□ -0.49
VAM6Q07468 TIR4YOR009W 1464 nt12□□□□□ -0.49
VAM6Q07468 YLR154C-GYLR154C-G 150 nt11.99□□□□□ -0.49
VAM6Q07468 YLR281CYLR281C 468 nt11.96□□□□□ -0.49
VAM6Q07468 PET9YBL030C 957 nt11.95□□□□□ -0.5
VAM6Q07468 WHI5YOR083W 888 nt11.94□□□□□ -0.5
VAM6Q07468 IRC15YPL017C 1500 nt11.94□□□□□ -0.5
VAM6Q07468 YBR220CYBR220C 1683 nt11.92□□□□□ -0.5
VAM6Q07468 YCH1YGR203W 447 nt11.92□□□□□ -0.5
VAM6Q07468 YJL152WYJL152W 360 nt11.92□□□□□ -0.5
VAM6Q07468 SDH1YKL148C 1923 nt11.89□□□□□ -0.51
VAM6Q07468 RTS2YOR077W 699 nt11.88□□□□□ -0.51
VAM6Q07468 YMR057CYMR057C 372 nt11.87□□□□□ -0.51
VAM6Q07468 GIS3YLR094C 1509 nt11.85□□□□□ -0.51
VAM6Q07468 tM(CAU)CtM(CAU)C 72 nt11.83□□□□□ -0.52
VAM6Q07468 IMT4tM(CAU)E 72 nt11.83□□□□□ -0.52
VAM6Q07468 IMT3tM(CAU)J3 72 nt11.83□□□□□ -0.52
VAM6Q07468 IMT1tM(CAU)O1 72 nt11.83□□□□□ -0.52
VAM6Q07468 IMT2tM(CAU)P 72 nt11.83□□□□□ -0.52
VAM6Q07468 SCC4YER147C 1875 nt11.81□□□□□ -0.52
VAM6Q07468 PUS2YGL063W 1113 nt11.8□□□□□ -0.52
VAM6Q07468 UME6YDR207C 2511 nt11.77□□□□□ -0.53
VAM6Q07468 CUE1YMR264W 612 nt11.76□□□□□ -0.53
VAM6Q07468 YCL048W-AYCL048W-A 240 nt11.72□□□□□ -0.53
VAM6Q07468 DSK2YMR276W 1122 nt11.69□□□□□ -0.54
VAM6Q07468 IMP2'YIL154C 1041 nt11.67□□□□□ -0.54
VAM6Q07468 IDH1YNL037C 1083 nt11.67□□□□□ -0.54
VAM6Q07468 PCH2YBR186W 1695 nt11.67□□□□□ -0.54
VAM6Q07468 YLR236CYLR236C 324 nt11.66□□□□□ -0.54
VAM6Q07468 GUT2YIL155C 1950 nt11.66□□□□□ -0.54
VAM6Q07468 YPR011CYPR011C 981 nt11.63□□□□□ -0.55
VAM6Q07468 YIL100WYIL100W 354 nt11.61□□□□□ -0.55
VAM6Q07468 GBP2YCL011C 1284 nt11.6□□□□□ -0.55
VAM6Q07468 YSC84YHR016C 1407 nt11.54□□□□□ -0.56
VAM6Q07468 FMP45YDL222C 930 nt11.52□□□□□ -0.57
VAM6Q07468 YDR433WYDR433W 441 nt11.5□□□□□ -0.57
VAM6Q07468 RRD1YIL153W 1182 nt11.49□□□□□ -0.57
VAM6Q07468 SEC11YIR022W 504 nt11.49□□□□□ -0.57
VAM6Q07468 RRT12YCR045C 1476 nt11.49□□□□□ -0.57
VAM6Q07468 YNL195CYNL195C 786 nt11.48□□□□□ -0.57
VAM6Q07468 TCD2YKL027W 1344 nt11.48□□□□□ -0.57
VAM6Q07468 YHL050CYHL050C 2094 nt11.48□□□□□ -0.57
VAM6Q07468 LPX1YOR084W 1164 nt11.47□□□□□ -0.57
VAM6Q07468 ERV46YAL042W 1248 nt11.46□□□□□ -0.57
VAM6Q07468 PIB2YGL023C 1908 nt11.46□□□□□ -0.58
VAM6Q07468 DED1YOR204W 1815 nt11.46□□□□□ -0.58
VAM6Q07468 MXR2YCL033C 507 nt11.45□□□□□ -0.58
VAM6Q07468 BOR1YNL275W 1731 nt11.39□□□□□ -0.59
VAM6Q07468 YKR040CYKR040C 504 nt11.37□□□□□ -0.59
VAM6Q07468 FMT1YBL013W 1206 nt11.36□□□□□ -0.59
VAM6Q07468 FMP52YER004W 696 nt11.35□□□□□ -0.59
VAM6Q07468 MCH5YOR306C 1566 nt11.28□□□□□ -0.6
VAM6Q07468 SOR2YDL246C 1074 nt11.26□□□□□ -0.61
VAM6Q07468 SOR1YJR159W 1074 nt11.26□□□□□ -0.61
VAM6Q07468 CWP1YKL096W 720 nt11.26□□□□□ -0.61
VAM6Q07468 FRD1YEL047C 1413 nt11.26□□□□□ -0.61
VAM6Q07468 PCM1YEL058W 1674 nt11.25□□□□□ -0.61
VAM6Q07468 ADH2YMR303C 1047 nt11.25□□□□□ -0.61
VAM6Q07468 YCL042WYCL042W 360 nt11.25□□□□□ -0.61
VAM6Q07468 RTF1YGL244W 1677 nt11.24□□□□□ -0.61
VAM6Q07468 SPP1YPL138C 1062 nt11.21□□□□□ -0.61
VAM6Q07468 SNF6YHL025W 999 nt11.18□□□□□ -0.62
VAM6Q07468 LCB1YMR296C 1677 nt11.17□□□□□ -0.62
VAM6Q07468 BOP3YNL042W 1191 nt11.16□□□□□ -0.62
VAM6Q07468 NCP1YHR042W 2076 nt11.15□□□□□ -0.62
VAM6Q07468 SIM1YIL123W 1431 nt11.11□□□□□ -0.63
VAM6Q07468 PTK1YKL198C 1989 nt11.11□□□□□ -0.63
VAM6Q07468 BIO4YNR057C 714 nt11.08□□□□□ -0.64
VAM6Q07468 YIH1YCR059C 777 nt11.05□□□□□ -0.64
VAM6Q07468 PTH1YHR189W 573 nt11.04□□□□□ -0.64
VAM6Q07468 RNQ1YCL028W 1218 nt11.02□□□□□ -0.65
VAM6Q07468 DIC1YLR348C 897 nt11.01□□□□□ -0.65
VAM6Q07468 ALG12YNR030W 1656 nt10.99□□□□□ -0.65
VAM6Q07468 YLL053CYLL053C 459 nt10.97□□□□□ -0.65
VAM6Q07468 YLR235CYLR235C 399 nt10.97□□□□□ -0.65
VAM6Q07468 LYS4YDR234W 2082 nt10.93□□□□□ -0.66
VAM6Q07468 RTG1YOL067C 534 nt10.92□□□□□ -0.66
VAM6Q07468 ERF2YLR246W 1080 nt10.9□□□□□ -0.66
VAM6Q07468 FTR1YER145C 1215 nt10.89□□□□□ -0.67
VAM6Q07468 YKL030WYKL030W 606 nt10.89□□□□□ -0.67
VAM6Q07468 TIM23YNR017W 669 nt10.89□□□□□ -0.67
VAM6Q07468 CRR1YLR213C 1269 nt10.87□□□□□ -0.67
VAM6Q07468 YJL225CYJL225C 5277 nt10.86□□□□□ -0.67
VAM6Q07468 GAL1YBR020W 1587 nt10.86□□□□□ -0.67
VAM6Q07468 ATF2YGR177C 1608 nt10.85□□□□□ -0.67
VAM6Q07468 MRPL8YJL063C 717 nt10.85□□□□□ -0.67
VAM6Q07468 HSP60YLR259C 1719 nt10.84□□□□□ -0.67
VAM6Q07468 YLR179CYLR179C 606 nt10.84□□□□□ -0.67
VAM6Q07468 YFL054CYFL054C 1941 nt10.84□□□□□ -0.67
VAM6Q07468 TRM5YHR070W 1500 nt10.84□□□□□ -0.67
VAM6Q07468 YEL076C-AYEL076C-A 651 nt10.82□□□□□ -0.68
Retrieved 100 of 7,029 protein–RNA pairs in 13.1 ms