Protein–RNA interactions for Protein: Q04377

LCD1, DNA damage checkpoint protein LCD1, yeastyeast

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LCD1Q04377 PCH2YBR186W 1695 nt14□□□□□ -0.17
LCD1Q04377 SUF2tP(AGG)C 72 nt13.99□□□□□ -0.17
LCD1Q04377 SUF10tP(AGG)N 72 nt13.99□□□□□ -0.17
LCD1Q04377 PAC11YDR488C 1602 nt13.98□□□□□ -0.17
LCD1Q04377 GUT2YIL155C 1950 nt13.94□□□□□ -0.18
LCD1Q04377 SEC11YIR022W 504 nt13.94□□□□□ -0.18
LCD1Q04377 ART5YGR068C 1761 nt13.94□□□□□ -0.18
LCD1Q04377 GFD2YCL036W 1701 nt13.93□□□□□ -0.18
LCD1Q04377 YFL021C-AYFL021C-A 855 nt13.86□□□□□ -0.19
LCD1Q04377 RTS2YOR077W 699 nt13.86□□□□□ -0.19
LCD1Q04377 YGR021WYGR021W 873 nt13.83□□□□□ -0.2
LCD1Q04377 YOL037CYOL037C 354 nt13.83□□□□□ -0.2
LCD1Q04377 YSC84YHR016C 1407 nt13.82□□□□□ -0.2
LCD1Q04377 tM(CAU)CtM(CAU)C 72 nt13.8□□□□□ -0.2
LCD1Q04377 IMT4tM(CAU)E 72 nt13.8□□□□□ -0.2
LCD1Q04377 IMT3tM(CAU)J3 72 nt13.8□□□□□ -0.2
LCD1Q04377 IMT1tM(CAU)O1 72 nt13.8□□□□□ -0.2
LCD1Q04377 IMT2tM(CAU)P 72 nt13.8□□□□□ -0.2
LCD1Q04377 HOM6YJR139C 1080 nt13.79□□□□□ -0.2
LCD1Q04377 PET9YBL030C 957 nt13.78□□□□□ -0.2
LCD1Q04377 MNP1YGL068W 585 nt13.76□□□□□ -0.21
LCD1Q04377 YHL050CYHL050C 2094 nt13.75□□□□□ -0.21
LCD1Q04377 PIB2YGL023C 1908 nt13.74□□□□□ -0.21
LCD1Q04377 CUE1YMR264W 612 nt13.69□□□□□ -0.22
LCD1Q04377 RRT12YCR045C 1476 nt13.68□□□□□ -0.22
LCD1Q04377 TIR4YOR009W 1464 nt13.67□□□□□ -0.22
LCD1Q04377 YCH1YGR203W 447 nt13.65□□□□□ -0.22
LCD1Q04377 Q0182Q0182 405 nt13.62□□□□□ -0.23
LCD1Q04377 RTF1YGL244W 1677 nt13.62□□□□□ -0.23
LCD1Q04377 YMR057CYMR057C 372 nt13.6□□□□□ -0.23
LCD1Q04377 RKM5YLR137W 1104 nt13.58□□□□□ -0.24
LCD1Q04377 YNL195CYNL195C 786 nt13.55□□□□□ -0.24
LCD1Q04377 YIL100WYIL100W 354 nt13.53□□□□□ -0.24
LCD1Q04377 FPS1YLL043W 2010 nt13.51□□□□□ -0.25
LCD1Q04377 MOT3YMR070W 1473 nt13.49□□□□□ -0.25
LCD1Q04377 BOP3YNL042W 1191 nt13.49□□□□□ -0.25
LCD1Q04377 PUS2YGL063W 1113 nt13.48□□□□□ -0.25
LCD1Q04377 PTK1YKL198C 1989 nt13.45□□□□□ -0.26
LCD1Q04377 YLR281CYLR281C 468 nt13.44□□□□□ -0.26
LCD1Q04377 NVJ2YPR091C 2313 nt13.44□□□□□ -0.26
LCD1Q04377 YLR236CYLR236C 324 nt13.42□□□□□ -0.26
LCD1Q04377 YJL152WYJL152W 360 nt13.35□□□□□ -0.27
LCD1Q04377 NCP1YHR042W 2076 nt13.33□□□□□ -0.28
LCD1Q04377 WHI5YOR083W 888 nt13.3□□□□□ -0.28
LCD1Q04377 YLR154C-GYLR154C-G 150 nt13.29□□□□□ -0.28
LCD1Q04377 YCL048W-AYCL048W-A 240 nt13.27□□□□□ -0.29
LCD1Q04377 MRPL8YJL063C 717 nt13.24□□□□□ -0.29
LCD1Q04377 YFL054CYFL054C 1941 nt13.16□□□□□ -0.3
LCD1Q04377 LCB1YMR296C 1677 nt13.14□□□□□ -0.31
LCD1Q04377 FMP45YDL222C 930 nt13.12□□□□□ -0.31
LCD1Q04377 DSK2YMR276W 1122 nt13.1□□□□□ -0.31
LCD1Q04377 IMP2'YIL154C 1041 nt13.08□□□□□ -0.32
LCD1Q04377 SPT8YLR055C 1809 nt13.07□□□□□ -0.32
LCD1Q04377 YPR011CYPR011C 981 nt13.05□□□□□ -0.32
LCD1Q04377 RRD1YIL153W 1182 nt13□□□□□ -0.33
LCD1Q04377 ADO1YJR105W 1023 nt12.99□□□□□ -0.33
LCD1Q04377 BOR1YNL275W 1731 nt12.91□□□□□ -0.34
LCD1Q04377 SIM1YIL123W 1431 nt12.91□□□□□ -0.34
LCD1Q04377 GBP2YCL011C 1284 nt12.9□□□□□ -0.34
LCD1Q04377 PCM1YEL058W 1674 nt12.89□□□□□ -0.35
LCD1Q04377 FMP52YER004W 696 nt12.89□□□□□ -0.35
LCD1Q04377 DED1YOR204W 1815 nt12.88□□□□□ -0.35
LCD1Q04377 IDH1YNL037C 1083 nt12.88□□□□□ -0.35
LCD1Q04377 LYS4YDR234W 2082 nt12.88□□□□□ -0.35
LCD1Q04377 YEL076C-AYEL076C-A 651 nt12.87□□□□□ -0.35
LCD1Q04377 YEL076CYEL076C 651 nt12.87□□□□□ -0.35
LCD1Q04377 UBX6YJL048C 1191 nt12.87□□□□□ -0.35
LCD1Q04377 YLR464WYLR464W 651 nt12.87□□□□□ -0.35
LCD1Q04377 SWE1YJL187C 2460 nt12.83□□□□□ -0.36
LCD1Q04377 FMT1YBL013W 1206 nt12.82□□□□□ -0.36
LCD1Q04377 TCD2YKL027W 1344 nt12.82□□□□□ -0.36
LCD1Q04377 ADH2YMR303C 1047 nt12.76□□□□□ -0.37
LCD1Q04377 BIO4YNR057C 714 nt12.76□□□□□ -0.37
LCD1Q04377 ERV46YAL042W 1248 nt12.75□□□□□ -0.37
LCD1Q04377 CWP1YKL096W 720 nt12.75□□□□□ -0.37
LCD1Q04377 RTG1YOL067C 534 nt12.75□□□□□ -0.37
LCD1Q04377 SNF6YHL025W 999 nt12.73□□□□□ -0.37
LCD1Q04377 LPX1YOR084W 1164 nt12.73□□□□□ -0.37
LCD1Q04377 SPP1YPL138C 1062 nt12.7□□□□□ -0.38
LCD1Q04377 HSP60YLR259C 1719 nt12.68□□□□□ -0.38
LCD1Q04377 YDR433WYDR433W 441 nt12.61□□□□□ -0.39
LCD1Q04377 MXR2YCL033C 507 nt12.61□□□□□ -0.39
LCD1Q04377 ERF2YLR246W 1080 nt12.59□□□□□ -0.39
LCD1Q04377 SOR2YDL246C 1074 nt12.58□□□□□ -0.4
LCD1Q04377 SOR1YJR159W 1074 nt12.58□□□□□ -0.4
LCD1Q04377 YKR040CYKR040C 504 nt12.58□□□□□ -0.4
LCD1Q04377 CRR1YLR213C 1269 nt12.58□□□□□ -0.4
LCD1Q04377 UME6YDR207C 2511 nt12.57□□□□□ -0.4
LCD1Q04377 YDR094WYDR094W 336 nt12.55□□□□□ -0.4
LCD1Q04377 GLK1YCL040W 1503 nt12.55□□□□□ -0.4
LCD1Q04377 YCL042WYCL042W 360 nt12.54□□□□□ -0.4
LCD1Q04377 YIH1YCR059C 777 nt12.53□□□□□ -0.4
LCD1Q04377 HUA1YGR268C 597 nt12.53□□□□□ -0.4
LCD1Q04377 YHR056W-AYHR056W-A 435 nt12.53□□□□□ -0.4
LCD1Q04377 YLL053CYLL053C 459 nt12.52□□□□□ -0.41
LCD1Q04377 YFL015W-AYFL015W-A 318 nt12.5□□□□□ -0.41
LCD1Q04377 YJL225CYJL225C 5277 nt12.5□□□□□ -0.41
LCD1Q04377 MIC10YCL057C-A 294 nt12.49□□□□□ -0.41
LCD1Q04377 FUR4YBR021W 1902 nt12.48□□□□□ -0.41
LCD1Q04377 ATF2YGR177C 1608 nt12.48□□□□□ -0.41
Retrieved 100 of 7,029 protein–RNA pairs in 14.5 ms