Protein–RNA interactions for Protein: Q04338

VTI1, t-SNARE VTI1, yeastyeast

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VTI1Q04338 Q0182Q0182 405 nt13.05□□□□□ -0.32
VTI1Q04338 ART5YGR068C 1761 nt13.02□□□□□ -0.33
VTI1Q04338 SCC4YER147C 1875 nt13.02□□□□□ -0.33
VTI1Q04338 MNP1YGL068W 585 nt13□□□□□ -0.33
VTI1Q04338 GFD2YCL036W 1701 nt12.99□□□□□ -0.33
VTI1Q04338 GIS3YLR094C 1509 nt12.98□□□□□ -0.33
VTI1Q04338 RTS2YOR077W 699 nt12.93□□□□□ -0.34
VTI1Q04338 RKM5YLR137W 1104 nt12.9□□□□□ -0.34
VTI1Q04338 PET9YBL030C 957 nt12.88□□□□□ -0.35
VTI1Q04338 YKL097CYKL097C 411 nt12.86□□□□□ -0.35
VTI1Q04338 TIR4YOR009W 1464 nt12.84□□□□□ -0.35
VTI1Q04338 PCH2YBR186W 1695 nt12.81□□□□□ -0.36
VTI1Q04338 SEC11YIR022W 504 nt12.8□□□□□ -0.36
VTI1Q04338 YCH1YGR203W 447 nt12.78□□□□□ -0.36
VTI1Q04338 YMR057CYMR057C 372 nt12.77□□□□□ -0.37
VTI1Q04338 YSC84YHR016C 1407 nt12.76□□□□□ -0.37
VTI1Q04338 GUT2YIL155C 1950 nt12.76□□□□□ -0.37
VTI1Q04338 CUE1YMR264W 612 nt12.75□□□□□ -0.37
VTI1Q04338 YHL050CYHL050C 2094 nt12.68□□□□□ -0.38
VTI1Q04338 NPL3YDR432W 1245 nt12.67□□□□□ -0.38
VTI1Q04338 RRT12YCR045C 1476 nt12.65□□□□□ -0.38
VTI1Q04338 YJL152WYJL152W 360 nt12.64□□□□□ -0.39
VTI1Q04338 FPS1YLL043W 2010 nt12.63□□□□□ -0.39
VTI1Q04338 YIL100WYIL100W 354 nt12.62□□□□□ -0.39
VTI1Q04338 YLR154C-GYLR154C-G 150 nt12.6□□□□□ -0.39
VTI1Q04338 YNL195CYNL195C 786 nt12.58□□□□□ -0.4
VTI1Q04338 YOL037CYOL037C 354 nt12.57□□□□□ -0.4
VTI1Q04338 PIB2YGL023C 1908 nt12.56□□□□□ -0.4
VTI1Q04338 PAC11YDR488C 1602 nt12.55□□□□□ -0.4
VTI1Q04338 YLR236CYLR236C 324 nt12.54□□□□□ -0.4
VTI1Q04338 YCL048W-AYCL048W-A 240 nt12.5□□□□□ -0.41
VTI1Q04338 RTF1YGL244W 1677 nt12.5□□□□□ -0.41
VTI1Q04338 YOR139CYOR139C 393 nt12.43□□□□□ -0.42
VTI1Q04338 BOP3YNL042W 1191 nt12.41□□□□□ -0.42
VTI1Q04338 WHI5YOR083W 888 nt12.37□□□□□ -0.43
VTI1Q04338 YLR281CYLR281C 468 nt12.32□□□□□ -0.44
VTI1Q04338 PTK1YKL198C 1989 nt12.31□□□□□ -0.44
VTI1Q04338 NCP1YHR042W 2076 nt12.28□□□□□ -0.44
VTI1Q04338 RRD1YIL153W 1182 nt12.23□□□□□ -0.45
VTI1Q04338 IDH1YNL037C 1083 nt12.23□□□□□ -0.45
VTI1Q04338 GBP2YCL011C 1284 nt12.22□□□□□ -0.45
VTI1Q04338 LCB1YMR296C 1677 nt12.19□□□□□ -0.46
VTI1Q04338 DED1YOR204W 1815 nt12.15□□□□□ -0.46
VTI1Q04338 NVJ2YPR091C 2313 nt12.13□□□□□ -0.47
VTI1Q04338 TCD2YKL027W 1344 nt12.12□□□□□ -0.47
VTI1Q04338 YFL054CYFL054C 1941 nt12.1□□□□□ -0.47
VTI1Q04338 FMP52YER004W 696 nt12.1□□□□□ -0.47
VTI1Q04338 PUS2YGL063W 1113 nt12.1□□□□□ -0.47
VTI1Q04338 PCM1YEL058W 1674 nt12.08□□□□□ -0.48
VTI1Q04338 FMT1YBL013W 1206 nt12.07□□□□□ -0.48
VTI1Q04338 MOT3YMR070W 1473 nt12.07□□□□□ -0.48
VTI1Q04338 SIM1YIL123W 1431 nt12.05□□□□□ -0.48
VTI1Q04338 IMP2'YIL154C 1041 nt12.05□□□□□ -0.48
VTI1Q04338 DSK2YMR276W 1122 nt12.05□□□□□ -0.48
VTI1Q04338 YDR433WYDR433W 441 nt12.02□□□□□ -0.49
VTI1Q04338 ADH2YMR303C 1047 nt12.02□□□□□ -0.49
VTI1Q04338 CWP1YKL096W 720 nt12.01□□□□□ -0.49
VTI1Q04338 YPR011CYPR011C 981 nt12□□□□□ -0.49
VTI1Q04338 MXR2YCL033C 507 nt12□□□□□ -0.49
VTI1Q04338 SPT8YLR055C 1809 nt11.98□□□□□ -0.49
VTI1Q04338 tM(CAU)CtM(CAU)C 72 nt11.98□□□□□ -0.49
VTI1Q04338 IMT4tM(CAU)E 72 nt11.98□□□□□ -0.49
VTI1Q04338 IMT3tM(CAU)J3 72 nt11.98□□□□□ -0.49
VTI1Q04338 IMT1tM(CAU)O1 72 nt11.98□□□□□ -0.49
VTI1Q04338 IMT2tM(CAU)P 72 nt11.98□□□□□ -0.49
VTI1Q04338 FMP45YDL222C 930 nt11.96□□□□□ -0.49
VTI1Q04338 SNF6YHL025W 999 nt11.96□□□□□ -0.49
VTI1Q04338 BIO4YNR057C 714 nt11.93□□□□□ -0.5
VTI1Q04338 LYS4YDR234W 2082 nt11.93□□□□□ -0.5
VTI1Q04338 SOR2YDL246C 1074 nt11.87□□□□□ -0.51
VTI1Q04338 SOR1YJR159W 1074 nt11.87□□□□□ -0.51
VTI1Q04338 LPX1YOR084W 1164 nt11.87□□□□□ -0.51
VTI1Q04338 YCL042WYCL042W 360 nt11.87□□□□□ -0.51
VTI1Q04338 ERV46YAL042W 1248 nt11.84□□□□□ -0.51
VTI1Q04338 YKR040CYKR040C 504 nt11.82□□□□□ -0.52
VTI1Q04338 FRD1YEL047C 1413 nt11.79□□□□□ -0.52
VTI1Q04338 SWE1YJL187C 2460 nt11.79□□□□□ -0.52
VTI1Q04338 YIH1YCR059C 777 nt11.78□□□□□ -0.52
VTI1Q04338 ERF2YLR246W 1080 nt11.76□□□□□ -0.53
VTI1Q04338 YLL053CYLL053C 459 nt11.75□□□□□ -0.53
VTI1Q04338 RNQ1YCL028W 1218 nt11.74□□□□□ -0.53
VTI1Q04338 CRR1YLR213C 1269 nt11.73□□□□□ -0.53
VTI1Q04338 BOR1YNL275W 1731 nt11.7□□□□□ -0.54
VTI1Q04338 ATF2YGR177C 1608 nt11.67□□□□□ -0.54
VTI1Q04338 MIC10YCL057C-A 294 nt11.66□□□□□ -0.54
VTI1Q04338 HEM12YDR047W 1089 nt11.64□□□□□ -0.55
VTI1Q04338 YHR056W-AYHR056W-A 435 nt11.64□□□□□ -0.55
VTI1Q04338 FTR1YER145C 1215 nt11.63□□□□□ -0.55
VTI1Q04338 DIC1YLR348C 897 nt11.63□□□□□ -0.55
VTI1Q04338 SNG1YGR197C 1644 nt11.6□□□□□ -0.55
VTI1Q04338 TRM5YHR070W 1500 nt11.6□□□□□ -0.55
VTI1Q04338 GAL1YBR020W 1587 nt11.59□□□□□ -0.55
VTI1Q04338 YFL067WYFL067W 528 nt11.59□□□□□ -0.55
VTI1Q04338 DDR2YOL052C-A 186 nt11.55□□□□□ -0.56
VTI1Q04338 RAX1YOR301W 1308 nt11.55□□□□□ -0.56
VTI1Q04338 HSP60YLR259C 1719 nt11.55□□□□□ -0.56
VTI1Q04338 RPM1RPM1 483 nt11.53□□□□□ -0.56
VTI1Q04338 PTH1YHR189W 573 nt11.52□□□□□ -0.57
VTI1Q04338 CCA1YER168C 1641 nt11.52□□□□□ -0.57
VTI1Q04338 SPP1YPL138C 1062 nt11.5□□□□□ -0.57
Retrieved 100 of 7,029 protein–RNA pairs in 40.1 ms