Protein–RNA interactions for Protein: Q03957

CTK1, CTD kinase subunit alpha, yeastyeast

Known RBP Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CTK1Q03957 YHR165W-AYHR165W-A 312 nt11.9□□□□□ -0.5
CTK1Q03957 YLR154C-GYLR154C-G 150 nt11.88□□□□□ -0.51
CTK1Q03957 SIS1YNL007C 1059 nt11.85□□□□□ -0.51
CTK1Q03957 MEP2YNL142W 1500 nt11.85□□□□□ -0.51
CTK1Q03957 YPR011CYPR011C 981 nt11.81□□□□□ -0.52
CTK1Q03957 PTP1YDL230W 1008 nt11.78□□□□□ -0.52
CTK1Q03957 YLR236CYLR236C 324 nt11.78□□□□□ -0.52
CTK1Q03957 RPP2AYOL039W 321 nt11.78□□□□□ -0.52
CTK1Q03957 DSK2YMR276W 1122 nt11.75□□□□□ -0.53
CTK1Q03957 TIR4YOR009W 1464 nt11.75□□□□□ -0.53
CTK1Q03957 YCH1YGR203W 447 nt11.74□□□□□ -0.53
CTK1Q03957 YJL152WYJL152W 360 nt11.74□□□□□ -0.53
CTK1Q03957 MOT3YMR070W 1473 nt11.73□□□□□ -0.53
CTK1Q03957 DCW1YKL046C 1350 nt11.71□□□□□ -0.53
CTK1Q03957 FMP45YDL222C 930 nt11.68□□□□□ -0.54
CTK1Q03957 ART5YGR068C 1761 nt11.68□□□□□ -0.54
CTK1Q03957 IMP2'YIL154C 1041 nt11.66□□□□□ -0.54
CTK1Q03957 CAC2YML102W 1407 nt11.66□□□□□ -0.54
CTK1Q03957 GFD2YCL036W 1701 nt11.63□□□□□ -0.55
CTK1Q03957 BDF1YLR399C 2061 nt11.61□□□□□ -0.55
CTK1Q03957 PET9YBL030C 957 nt11.59□□□□□ -0.55
CTK1Q03957 YMR057CYMR057C 372 nt11.58□□□□□ -0.56
CTK1Q03957 IDH1YNL037C 1083 nt11.56□□□□□ -0.56
CTK1Q03957 LPX1YOR084W 1164 nt11.55□□□□□ -0.56
CTK1Q03957 EMI2YDR516C 1503 nt11.54□□□□□ -0.56
CTK1Q03957 ERV46YAL042W 1248 nt11.5□□□□□ -0.57
CTK1Q03957 RTS2YOR077W 699 nt11.49□□□□□ -0.57
CTK1Q03957 YMR090WYMR090W 684 nt11.48□□□□□ -0.57
CTK1Q03957 GBP2YCL011C 1284 nt11.48□□□□□ -0.57
CTK1Q03957 IRC15YPL017C 1500 nt11.48□□□□□ -0.57
CTK1Q03957 TAT1YBR069C 1860 nt11.47□□□□□ -0.57
CTK1Q03957 YDL221WYDL221W 552 nt11.47□□□□□ -0.57
CTK1Q03957 YDR433WYDR433W 441 nt11.47□□□□□ -0.57
CTK1Q03957 YCL048W-AYCL048W-A 240 nt11.44□□□□□ -0.58
CTK1Q03957 FPS1YLL043W 2010 nt11.43□□□□□ -0.58
CTK1Q03957 SPP1YPL138C 1062 nt11.42□□□□□ -0.58
CTK1Q03957 MXR2YCL033C 507 nt11.42□□□□□ -0.58
CTK1Q03957 YBR220CYBR220C 1683 nt11.39□□□□□ -0.59
CTK1Q03957 YKR040CYKR040C 504 nt11.38□□□□□ -0.59
CTK1Q03957 GIS3YLR094C 1509 nt11.37□□□□□ -0.59
CTK1Q03957 CUE1YMR264W 612 nt11.34□□□□□ -0.59
CTK1Q03957 DED1YOR204W 1815 nt11.32□□□□□ -0.6
CTK1Q03957 RRD1YIL153W 1182 nt11.32□□□□□ -0.6
CTK1Q03957 TCD2YKL027W 1344 nt11.32□□□□□ -0.6
CTK1Q03957 SDH1YKL148C 1923 nt11.29□□□□□ -0.6
CTK1Q03957 SCC4YER147C 1875 nt11.25□□□□□ -0.61
CTK1Q03957 FMT1YBL013W 1206 nt11.22□□□□□ -0.61
CTK1Q03957 FRD1YEL047C 1413 nt11.21□□□□□ -0.61
CTK1Q03957 RTG1YOL067C 534 nt11.2□□□□□ -0.62
CTK1Q03957 MRPL8YJL063C 717 nt11.18□□□□□ -0.62
CTK1Q03957 YIL100WYIL100W 354 nt11.16□□□□□ -0.62
CTK1Q03957 YEL076C-AYEL076C-A 651 nt11.13□□□□□ -0.63
CTK1Q03957 YEL076CYEL076C 651 nt11.13□□□□□ -0.63
CTK1Q03957 YLR464WYLR464W 651 nt11.13□□□□□ -0.63
CTK1Q03957 PAC11YDR488C 1602 nt11.12□□□□□ -0.63
CTK1Q03957 SOR2YDL246C 1074 nt11.11□□□□□ -0.63
CTK1Q03957 SOR1YJR159W 1074 nt11.11□□□□□ -0.63
CTK1Q03957 SEC11YIR022W 504 nt11.09□□□□□ -0.63
CTK1Q03957 YCL042WYCL042W 360 nt11.09□□□□□ -0.63
CTK1Q03957 FMP52YER004W 696 nt11.07□□□□□ -0.64
CTK1Q03957 PCH2YBR186W 1695 nt11.07□□□□□ -0.64
CTK1Q03957 PTH1YHR189W 573 nt11.05□□□□□ -0.64
CTK1Q03957 CWP1YKL096W 720 nt11.05□□□□□ -0.64
CTK1Q03957 ADH2YMR303C 1047 nt11.05□□□□□ -0.64
CTK1Q03957 ADO1YJR105W 1023 nt11.04□□□□□ -0.64
CTK1Q03957 GUT2YIL155C 1950 nt11.01□□□□□ -0.65
CTK1Q03957 RRT12YCR045C 1476 nt11□□□□□ -0.65
CTK1Q03957 PCM1YEL058W 1674 nt10.97□□□□□ -0.65
CTK1Q03957 YSC84YHR016C 1407 nt10.96□□□□□ -0.65
CTK1Q03957 YHL050CYHL050C 2094 nt10.94□□□□□ -0.66
CTK1Q03957 YNL195CYNL195C 786 nt10.94□□□□□ -0.66
CTK1Q03957 YLR235CYLR235C 399 nt10.93□□□□□ -0.66
CTK1Q03957 HUA1YGR268C 597 nt10.92□□□□□ -0.66
CTK1Q03957 YKL030WYKL030W 606 nt10.91□□□□□ -0.66
CTK1Q03957 NVJ2YPR091C 2313 nt10.9□□□□□ -0.66
CTK1Q03957 LCB1YMR296C 1677 nt10.9□□□□□ -0.66
CTK1Q03957 SNF6YHL025W 999 nt10.9□□□□□ -0.66
CTK1Q03957 UBX6YJL048C 1191 nt10.86□□□□□ -0.67
CTK1Q03957 DIC1YLR348C 897 nt10.86□□□□□ -0.67
CTK1Q03957 YIH1YCR059C 777 nt10.82□□□□□ -0.68
CTK1Q03957 RNQ1YCL028W 1218 nt10.81□□□□□ -0.68
CTK1Q03957 TIM23YNR017W 669 nt10.8□□□□□ -0.68
CTK1Q03957 RTF1YGL244W 1677 nt10.79□□□□□ -0.68
CTK1Q03957 PIB2YGL023C 1908 nt10.78□□□□□ -0.68
CTK1Q03957 BIO4YNR057C 714 nt10.77□□□□□ -0.69
CTK1Q03957 SIM1YIL123W 1431 nt10.75□□□□□ -0.69
CTK1Q03957 YLL053CYLL053C 459 nt10.73□□□□□ -0.69
CTK1Q03957 YLR179CYLR179C 606 nt10.73□□□□□ -0.69
CTK1Q03957 BOP3YNL042W 1191 nt10.72□□□□□ -0.69
CTK1Q03957 YDR094WYDR094W 336 nt10.71□□□□□ -0.69
CTK1Q03957 WSC2YNL283C 1512 nt10.69□□□□□ -0.7
CTK1Q03957 FTR1YER145C 1215 nt10.66□□□□□ -0.7
CTK1Q03957 NCP1YHR042W 2076 nt10.64□□□□□ -0.71
CTK1Q03957 AHT1YHR093W 549 nt10.64□□□□□ -0.71
CTK1Q03957 YPR064WYPR064W 420 nt10.64□□□□□ -0.71
CTK1Q03957 tL(GAG)GtL(GAG)G 82 nt10.63□□□□□ -0.71
CTK1Q03957 GAL1YBR020W 1587 nt10.63□□□□□ -0.71
CTK1Q03957 TRM5YHR070W 1500 nt10.6□□□□□ -0.71
CTK1Q03957 TAD3YLR316C 969 nt10.6□□□□□ -0.71
CTK1Q03957 ATF2YGR177C 1608 nt10.58□□□□□ -0.72
Retrieved 100 of 7,029 protein–RNA pairs in 14.4 ms