Protein–RNA interactions for Protein: Q02725

VTC3, Vacuolar transporter chaperone 3, yeast

Predictions only

Length 835 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
VTC3	Q02725	SUF10	tP(AGG)N	72 nt		13.48	□□□□□ -0.25
VTC3	Q02725	WHI5	YOR083W	888 nt		13.48	□□□□□ -0.25
VTC3	Q02725	PUS2	YGL063W	1113 nt		13.45	□□□□□ -0.26
VTC3	Q02725	TAT1	YBR069C	1860 nt		13.43	□□□□□ -0.26
VTC3	Q02725	EMI2	YDR516C	1503 nt		13.43	□□□□□ -0.26
VTC3	Q02725	YLR154C-G	YLR154C-G	150 nt		13.37	□□□□□ -0.27
VTC3	Q02725	YMR090W	YMR090W	684 nt		13.37	□□□□□ -0.27
VTC3	Q02725	YBR220C	YBR220C	1683 nt		13.34	□□□□□ -0.27
VTC3	Q02725	SIS1	YNL007C	1059 nt		13.34	□□□□□ -0.27
VTC3	Q02725	YDL221W	YDL221W	552 nt		13.27	□□□□□ -0.29
VTC3	Q02725	RPP2A	YOL039W	321 nt		13.26	□□□□□ -0.29
VTC3	Q02725	CAC2	YML102W	1407 nt		13.25	□□□□□ -0.29
VTC3	Q02725	YJL152W	YJL152W	360 nt		13.24	□□□□□ -0.29
VTC3	Q02725	PTP1	YDL230W	1008 nt		13.21	□□□□□ -0.29
VTC3	Q02725	DSK2	YMR276W	1122 nt		13.21	□□□□□ -0.29
VTC3	Q02725	SDH1	YKL148C	1923 nt		13.2	□□□□□ -0.3
VTC3	Q02725	YPR011C	YPR011C	981 nt		13.19	□□□□□ -0.3
VTC3	Q02725	TIR4	YOR009W	1464 nt		13.17	□□□□□ -0.3
VTC3	Q02725	YLR236C	YLR236C	324 nt		13.17	□□□□□ -0.3
VTC3	Q02725	IMP2'	YIL154C	1041 nt		13.16	□□□□□ -0.3
VTC3	Q02725	YCH1	YGR203W	447 nt		13.15	□□□□□ -0.3
VTC3	Q02725	ART5	YGR068C	1761 nt		13.13	□□□□□ -0.31
VTC3	Q02725	FMP45	YDL222C	930 nt		13.12	□□□□□ -0.31
VTC3	Q02725	MOT3	YMR070W	1473 nt		13.08	□□□□□ -0.32
VTC3	Q02725	SCC4	YER147C	1875 nt		13.06	□□□□□ -0.32
VTC3	Q02725	GFD2	YCL036W	1701 nt		13.05	□□□□□ -0.32
VTC3	Q02725	PET9	YBL030C	957 nt		13.05	□□□□□ -0.32
VTC3	Q02725	IDH1	YNL037C	1083 nt		13.04	□□□□□ -0.32
VTC3	Q02725	FPS1	YLL043W	2010 nt		13.04	□□□□□ -0.32
VTC3	Q02725	IRC15	YPL017C	1500 nt		13.03	□□□□□ -0.32
VTC3	Q02725	YMR057C	YMR057C	372 nt		13.02	□□□□□ -0.33
VTC3	Q02725	PAC11	YDR488C	1602 nt		13.01	□□□□□ -0.33
VTC3	Q02725	GIS3	YLR094C	1509 nt		12.98	□□□□□ -0.33
VTC3	Q02725	PCH2	YBR186W	1695 nt		12.97	□□□□□ -0.33
VTC3	Q02725	LPX1	YOR084W	1164 nt		12.94	□□□□□ -0.34
VTC3	Q02725	SEC11	YIR022W	504 nt		12.92	□□□□□ -0.34
VTC3	Q02725	GBP2	YCL011C	1284 nt		12.92	□□□□□ -0.34
VTC3	Q02725	YCL048W-A	YCL048W-A	240 nt		12.92	□□□□□ -0.34
VTC3	Q02725	YDR433W	YDR433W	441 nt		12.91	□□□□□ -0.34
VTC3	Q02725	ERV46	YAL042W	1248 nt		12.91	□□□□□ -0.34
VTC3	Q02725	GUT2	YIL155C	1950 nt		12.9	□□□□□ -0.34
VTC3	Q02725	RTS2	YOR077W	699 nt		12.9	□□□□□ -0.34
VTC3	Q02725	NVJ2	YPR091C	2313 nt		12.84	□□□□□ -0.35
VTC3	Q02725	YSC84	YHR016C	1407 nt		12.84	□□□□□ -0.35
VTC3	Q02725	MXR2	YCL033C	507 nt		12.81	□□□□□ -0.36
VTC3	Q02725	YKR040C	YKR040C	504 nt		12.8	□□□□□ -0.36
VTC3	Q02725	SPP1	YPL138C	1062 nt		12.76	□□□□□ -0.37
VTC3	Q02725	TCD2	YKL027W	1344 nt		12.75	□□□□□ -0.37
VTC3	Q02725	CUE1	YMR264W	612 nt		12.75	□□□□□ -0.37
VTC3	Q02725	YHL050C	YHL050C	2094 nt		12.72	□□□□□ -0.37
VTC3	Q02725	RRT12	YCR045C	1476 nt		12.71	□□□□□ -0.38
VTC3	Q02725	RRD1	YIL153W	1182 nt		12.69	□□□□□ -0.38
VTC3	Q02725	DED1	YOR204W	1815 nt		12.69	□□□□□ -0.38
VTC3	Q02725	PIB2	YGL023C	1908 nt		12.65	□□□□□ -0.38
VTC3	Q02725	RTF1	YGL244W	1677 nt		12.62	□□□□□ -0.39
VTC3	Q02725	YNL195C	YNL195C	786 nt		12.62	□□□□□ -0.39
VTC3	Q02725	YIL100W	YIL100W	354 nt		12.6	□□□□□ -0.39
VTC3	Q02725	MRPL8	YJL063C	717 nt		12.58	□□□□□ -0.4
VTC3	Q02725	FRD1	YEL047C	1413 nt		12.56	□□□□□ -0.4
VTC3	Q02725	FMT1	YBL013W	1206 nt		12.56	□□□□□ -0.4
VTC3	Q02725	RTG1	YOL067C	534 nt		12.53	□□□□□ -0.4
VTC3	Q02725	BOP3	YNL042W	1191 nt		12.52	□□□□□ -0.41
VTC3	Q02725	YCL042W	YCL042W	360 nt		12.51	□□□□□ -0.41
VTC3	Q02725	YEL076C-A	YEL076C-A	651 nt		12.49	□□□□□ -0.41
VTC3	Q02725	YEL076C	YEL076C	651 nt		12.49	□□□□□ -0.41
VTC3	Q02725	YLR464W	YLR464W	651 nt		12.49	□□□□□ -0.41
VTC3	Q02725	SOR2	YDL246C	1074 nt		12.48	□□□□□ -0.41
VTC3	Q02725	SOR1	YJR159W	1074 nt		12.48	□□□□□ -0.41
VTC3	Q02725	FMP52	YER004W	696 nt		12.47	□□□□□ -0.41
VTC3	Q02725	ADO1	YJR105W	1023 nt		12.45	□□□□□ -0.42
VTC3	Q02725	CWP1	YKL096W	720 nt		12.42	□□□□□ -0.42
VTC3	Q02725	PTK1	YKL198C	1989 nt		12.41	□□□□□ -0.42
VTC3	Q02725	PTH1	YHR189W	573 nt		12.4	□□□□□ -0.42
VTC3	Q02725	ADH2	YMR303C	1047 nt		12.39	□□□□□ -0.43
VTC3	Q02725	PCM1	YEL058W	1674 nt		12.33	□□□□□ -0.44
VTC3	Q02725	YLR235C	YLR235C	399 nt		12.32	□□□□□ -0.44
VTC3	Q02725	HUA1	YGR268C	597 nt		12.3	□□□□□ -0.44
VTC3	Q02725	SNF6	YHL025W	999 nt		12.28	□□□□□ -0.44
VTC3	Q02725	YKL030W	YKL030W	606 nt		12.28	□□□□□ -0.44
VTC3	Q02725	NCP1	YHR042W	2076 nt		12.27	□□□□□ -0.45
VTC3	Q02725	YFL054C	YFL054C	1941 nt		12.24	□□□□□ -0.45
VTC3	Q02725	LCB1	YMR296C	1677 nt		12.24	□□□□□ -0.45
VTC3	Q02725	DIC1	YLR348C	897 nt		12.21	□□□□□ -0.45
VTC3	Q02725	YIH1	YCR059C	777 nt		12.16	□□□□□ -0.46
VTC3	Q02725	TIM23	YNR017W	669 nt		12.16	□□□□□ -0.46
VTC3	Q02725	RNQ1	YCL028W	1218 nt		12.16	□□□□□ -0.46
VTC3	Q02725	UBX6	YJL048C	1191 nt		12.14	□□□□□ -0.47
VTC3	Q02725	SIM1	YIL123W	1431 nt		12.1	□□□□□ -0.47
VTC3	Q02725	SPT8	YLR055C	1809 nt		12.09	□□□□□ -0.47
VTC3	Q02725	YLR179C	YLR179C	606 nt		12.09	□□□□□ -0.47
VTC3	Q02725	BIO4	YNR057C	714 nt		12.09	□□□□□ -0.47
VTC3	Q02725	Q0182	Q0182	405 nt		12.08	□□□□□ -0.48
VTC3	Q02725	YLL053C	YLL053C	459 nt		12.06	□□□□□ -0.48
VTC3	Q02725	YDR094W	YDR094W	336 nt		12.03	□□□□□ -0.48
VTC3	Q02725	BOR1	YNL275W	1731 nt		12.02	□□□□□ -0.49
VTC3	Q02725	YPR064W	YPR064W	420 nt		11.99	□□□□□ -0.49
VTC3	Q02725	FTR1	YER145C	1215 nt		11.98	□□□□□ -0.49
VTC3	Q02725	WSC2	YNL283C	1512 nt		11.97	□□□□□ -0.49
VTC3	Q02725	tL(GAG)G	tL(GAG)G	82 nt		11.97	□□□□□ -0.49
VTC3	Q02725	AHT1	YHR093W	549 nt		11.96	□□□□□ -0.49

Retrieved 100 of 7,029 protein–RNA pairs in 32.7 ms