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Protein–RNA interactions for Protein: P53958
BOP3, Protein BOP3, yeast
Predictions only
Length
396 aa
.
Download Table
Protein
RNA
Prediction (catRAPID)
Interaction (RIP-Chip)
Gene
UniProt Accession
Gene
Ensembl Transcript ID
Length
Transcript Status
Prediction Score
Prediction z-Score
Detected Interaction
BOP3
P53958
ART5
YGR068C
1761 nt
13.27
□□□□□ -0.29
BOP3
P53958
SCC4
YER147C
1875 nt
13.25
□□□□□ -0.29
BOP3
P53958
GIS3
YLR094C
1509 nt
13.23
□□□□□ -0.29
BOP3
P53958
GFD2
YCL036W
1701 nt
13.23
□□□□□ -0.29
BOP3
P53958
MNP1
YGL068W
585 nt
13.23
□□□□□ -0.29
BOP3
P53958
RTS2
YOR077W
699 nt
13.19
□□□□□ -0.3
BOP3
P53958
RKM5
YLR137W
1104 nt
13.09
□□□□□ -0.31
BOP3
P53958
TIR4
YOR009W
1464 nt
13.08
□□□□□ -0.32
BOP3
P53958
PET9
YBL030C
957 nt
13.07
□□□□□ -0.32
BOP3
P53958
PCH2
YBR186W
1695 nt
13.05
□□□□□ -0.32
BOP3
P53958
YSC84
YHR016C
1407 nt
13.02
□□□□□ -0.33
BOP3
P53958
GUT2
YIL155C
1950 nt
13.01
□□□□□ -0.33
BOP3
P53958
YKL097C
YKL097C
411 nt
13
□□□□□ -0.33
BOP3
P53958
YMR057C
YMR057C
372 nt
13
□□□□□ -0.33
BOP3
P53958
SEC11
YIR022W
504 nt
12.97
□□□□□ -0.33
BOP3
P53958
CUE1
YMR264W
612 nt
12.96
□□□□□ -0.33
BOP3
P53958
YHL050C
YHL050C
2094 nt
12.95
□□□□□ -0.34
BOP3
P53958
RRT12
YCR045C
1476 nt
12.94
□□□□□ -0.34
BOP3
P53958
YCH1
YGR203W
447 nt
12.93
□□□□□ -0.34
BOP3
P53958
NPL3
YDR432W
1245 nt
12.89
□□□□□ -0.35
BOP3
P53958
FPS1
YLL043W
2010 nt
12.87
□□□□□ -0.35
BOP3
P53958
PIB2
YGL023C
1908 nt
12.86
□□□□□ -0.35
BOP3
P53958
YJL152W
YJL152W
360 nt
12.83
□□□□□ -0.36
BOP3
P53958
PAC11
YDR488C
1602 nt
12.81
□□□□□ -0.36
BOP3
P53958
YIL100W
YIL100W
354 nt
12.79
□□□□□ -0.36
BOP3
P53958
YLR154C-G
YLR154C-G
150 nt
12.79
□□□□□ -0.36
BOP3
P53958
YNL195C
YNL195C
786 nt
12.75
□□□□□ -0.37
BOP3
P53958
RTF1
YGL244W
1677 nt
12.72
□□□□□ -0.37
BOP3
P53958
YLR236C
YLR236C
324 nt
12.71
□□□□□ -0.37
BOP3
P53958
YOL037C
YOL037C
354 nt
12.69
□□□□□ -0.38
BOP3
P53958
YCL048W-A
YCL048W-A
240 nt
12.68
□□□□□ -0.38
BOP3
P53958
YOR139C
YOR139C
393 nt
12.64
□□□□□ -0.39
BOP3
P53958
BOP3
YNL042W
1191 nt
12.6
□□□□□ -0.39
BOP3
P53958
PTK1
YKL198C
1989 nt
12.58
□□□□□ -0.4
BOP3
P53958
WHI5
YOR083W
888 nt
12.55
□□□□□ -0.4
BOP3
P53958
NCP1
YHR042W
2076 nt
12.54
□□□□□ -0.4
BOP3
P53958
YLR281C
YLR281C
468 nt
12.51
□□□□□ -0.41
BOP3
P53958
RRD1
YIL153W
1182 nt
12.45
□□□□□ -0.42
BOP3
P53958
LCB1
YMR296C
1677 nt
12.44
□□□□□ -0.42
BOP3
P53958
GBP2
YCL011C
1284 nt
12.41
□□□□□ -0.42
BOP3
P53958
DED1
YOR204W
1815 nt
12.39
□□□□□ -0.43
BOP3
P53958
IDH1
YNL037C
1083 nt
12.38
□□□□□ -0.43
BOP3
P53958
YFL054C
YFL054C
1941 nt
12.33
□□□□□ -0.44
BOP3
P53958
FMT1
YBL013W
1206 nt
12.32
□□□□□ -0.44
BOP3
P53958
TCD2
YKL027W
1344 nt
12.29
□□□□□ -0.44
BOP3
P53958
PCM1
YEL058W
1674 nt
12.29
□□□□□ -0.44
BOP3
P53958
PUS2
YGL063W
1113 nt
12.27
□□□□□ -0.45
BOP3
P53958
YPR011C
YPR011C
981 nt
12.26
□□□□□ -0.45
BOP3
P53958
NVJ2
YPR091C
2313 nt
12.25
□□□□□ -0.45
BOP3
P53958
MXR2
YCL033C
507 nt
12.25
□□□□□ -0.45
BOP3
P53958
SIM1
YIL123W
1431 nt
12.25
□□□□□ -0.45
BOP3
P53958
FMP52
YER004W
696 nt
12.24
□□□□□ -0.45
BOP3
P53958
ADH2
YMR303C
1047 nt
12.24
□□□□□ -0.45
BOP3
P53958
CWP1
YKL096W
720 nt
12.22
□□□□□ -0.45
BOP3
P53958
SPT8
YLR055C
1809 nt
12.21
□□□□□ -0.45
BOP3
P53958
YDR433W
YDR433W
441 nt
12.21
□□□□□ -0.45
BOP3
P53958
DSK2
YMR276W
1122 nt
12.21
□□□□□ -0.45
BOP3
P53958
Q0182
Q0182
405 nt
12.18
□□□□□ -0.46
BOP3
P53958
LYS4
YDR234W
2082 nt
12.18
□□□□□ -0.46
BOP3
P53958
tM(CAU)C
tM(CAU)C
72 nt
12.17
□□□□□ -0.46
BOP3
P53958
IMT4
tM(CAU)E
72 nt
12.17
□□□□□ -0.46
BOP3
P53958
IMT3
tM(CAU)J3
72 nt
12.17
□□□□□ -0.46
BOP3
P53958
IMT1
tM(CAU)O1
72 nt
12.17
□□□□□ -0.46
BOP3
P53958
IMT2
tM(CAU)P
72 nt
12.17
□□□□□ -0.46
BOP3
P53958
FMP45
YDL222C
930 nt
12.16
□□□□□ -0.46
BOP3
P53958
IMP2'
YIL154C
1041 nt
12.14
□□□□□ -0.47
BOP3
P53958
BIO4
YNR057C
714 nt
12.14
□□□□□ -0.47
BOP3
P53958
SNF6
YHL025W
999 nt
12.13
□□□□□ -0.47
BOP3
P53958
LPX1
YOR084W
1164 nt
12.09
□□□□□ -0.47
BOP3
P53958
SOR2
YDL246C
1074 nt
12.04
□□□□□ -0.48
BOP3
P53958
SOR1
YJR159W
1074 nt
12.04
□□□□□ -0.48
BOP3
P53958
YCL042W
YCL042W
360 nt
12.03
□□□□□ -0.48
BOP3
P53958
SWE1
YJL187C
2460 nt
12.02
□□□□□ -0.49
BOP3
P53958
ERV46
YAL042W
1248 nt
12.01
□□□□□ -0.49
BOP3
P53958
FRD1
YEL047C
1413 nt
12
□□□□□ -0.49
BOP3
P53958
YKR040C
YKR040C
504 nt
11.98
□□□□□ -0.49
BOP3
P53958
YLL053C
YLL053C
459 nt
11.96
□□□□□ -0.49
BOP3
P53958
YIH1
YCR059C
777 nt
11.95
□□□□□ -0.5
BOP3
P53958
CRR1
YLR213C
1269 nt
11.92
□□□□□ -0.5
BOP3
P53958
ERF2
YLR246W
1080 nt
11.91
□□□□□ -0.5
BOP3
P53958
BOR1
YNL275W
1731 nt
11.91
□□□□□ -0.5
BOP3
P53958
MIC10
YCL057C-A
294 nt
11.9
□□□□□ -0.5
BOP3
P53958
ATF2
YGR177C
1608 nt
11.89
□□□□□ -0.51
BOP3
P53958
RNQ1
YCL028W
1218 nt
11.89
□□□□□ -0.51
BOP3
P53958
HEM12
YDR047W
1089 nt
11.82
□□□□□ -0.52
BOP3
P53958
YHR056W-A
YHR056W-A
435 nt
11.81
□□□□□ -0.52
BOP3
P53958
DIC1
YLR348C
897 nt
11.81
□□□□□ -0.52
BOP3
P53958
SNG1
YGR197C
1644 nt
11.81
□□□□□ -0.52
BOP3
P53958
TRM5
YHR070W
1500 nt
11.81
□□□□□ -0.52
BOP3
P53958
FTR1
YER145C
1215 nt
11.8
□□□□□ -0.52
BOP3
P53958
GAL1
YBR020W
1587 nt
11.79
□□□□□ -0.52
BOP3
P53958
HSP60
YLR259C
1719 nt
11.77
□□□□□ -0.52
BOP3
P53958
SPP1
YPL138C
1062 nt
11.75
□□□□□ -0.53
BOP3
P53958
YFL067W
YFL067W
528 nt
11.74
□□□□□ -0.53
BOP3
P53958
PTH1
YHR189W
573 nt
11.74
□□□□□ -0.53
BOP3
P53958
CCA1
YER168C
1641 nt
11.74
□□□□□ -0.53
BOP3
P53958
DDR2
YOL052C-A
186 nt
11.72
□□□□□ -0.53
BOP3
P53958
RAX1
YOR301W
1308 nt
11.71
□□□□□ -0.53
BOP3
P53958
FUR4
YBR021W
1902 nt
11.68
□□□□□ -0.54
BOP3
P53958
GLK1
YCL040W
1503 nt
11.67
□□□□□ -0.54
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Retrieved 100 of 7,029 protein–RNA pairs in 13.5 ms