Protein–RNA interactions for Protein: P52917

VPS4, Vacuolar protein sorting-associated protein 4, yeastyeast

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS4P52917 ADO1YJR105W 1023 nt14.53□□□□□ -0.08
VPS4P52917 PHO4YFR034C 939 nt14.52□□□□□ -0.09
VPS4P52917 YEL076C-AYEL076C-A 651 nt14.51□□□□□ -0.09
VPS4P52917 YEL076CYEL076C 651 nt14.51□□□□□ -0.09
VPS4P52917 YLR464WYLR464W 651 nt14.51□□□□□ -0.09
VPS4P52917 CCT6YDR188W 1641 nt14.49□□□□□ -0.09
VPS4P52917 LPX1YOR084W 1164 nt14.48□□□□□ -0.09
VPS4P52917 SPP1YPL138C 1062 nt14.47□□□□□ -0.09
VPS4P52917 RTG1YOL067C 534 nt14.43□□□□□ -0.1
VPS4P52917 ERV46YAL042W 1248 nt14.42□□□□□ -0.1
VPS4P52917 SIS1YNL007C 1059 nt14.33□□□□□ -0.12
VPS4P52917 PAC11YDR488C 1602 nt14.31□□□□□ -0.12
VPS4P52917 YJL152WYJL152W 360 nt14.27□□□□□ -0.13
VPS4P52917 SUF2tP(AGG)C 72 nt14.25□□□□□ -0.13
VPS4P52917 SUF10tP(AGG)N 72 nt14.25□□□□□ -0.13
VPS4P52917 IDH1YNL037C 1083 nt14.24□□□□□ -0.13
VPS4P52917 YDR433WYDR433W 441 nt14.21□□□□□ -0.13
VPS4P52917 YKR040CYKR040C 504 nt14.2□□□□□ -0.14
VPS4P52917 SSA4YER103W 1929 nt14.19□□□□□ -0.14
VPS4P52917 ALF1YNL148C 765 nt14.18□□□□□ -0.14
VPS4P52917 NVJ2YPR091C 2313 nt14.16□□□□□ -0.14
VPS4P52917 YDR094WYDR094W 336 nt14.12□□□□□ -0.15
VPS4P52917 YFL015W-AYFL015W-A 318 nt14.12□□□□□ -0.15
VPS4P52917 MXR2YCL033C 507 nt14.09□□□□□ -0.15
VPS4P52917 HUA1YGR268C 597 nt14.07□□□□□ -0.16
VPS4P52917 GBP2YCL011C 1284 nt14.05□□□□□ -0.16
VPS4P52917 YDR095CYDR095C 411 nt14.04□□□□□ -0.16
VPS4P52917 TIR4YOR009W 1464 nt14.04□□□□□ -0.16
VPS4P52917 YPS1YLR120C 1710 nt14.03□□□□□ -0.16
VPS4P52917 FPS1YLL043W 2010 nt13.95□□□□□ -0.18
VPS4P52917 SPT5YML010W 3192 nt13.91□□□□□ -0.18
VPS4P52917 CAC2YML102W 1407 nt13.85□□□□□ -0.19
VPS4P52917 BDF1YLR399C 2061 nt13.83□□□□□ -0.2
VPS4P52917 FRD1YEL047C 1413 nt13.81□□□□□ -0.2
VPS4P52917 TCD2YKL027W 1344 nt13.79□□□□□ -0.2
VPS4P52917 YHR165W-AYHR165W-A 312 nt13.78□□□□□ -0.2
VPS4P52917 ART5YGR068C 1761 nt13.77□□□□□ -0.21
VPS4P52917 YMR057CYMR057C 372 nt13.77□□□□□ -0.21
VPS4P52917 RPP2AYOL039W 321 nt13.75□□□□□ -0.21
VPS4P52917 YCL048W-AYCL048W-A 240 nt13.75□□□□□ -0.21
VPS4P52917 DED1YOR204W 1815 nt13.75□□□□□ -0.21
VPS4P52917 SBA1YKL117W 651 nt13.74□□□□□ -0.21
VPS4P52917 PET9YBL030C 957 nt13.71□□□□□ -0.21
VPS4P52917 PTP1YDL230W 1008 nt13.7□□□□□ -0.22
VPS4P52917 PTH1YHR189W 573 nt13.7□□□□□ -0.22
VPS4P52917 YKL030WYKL030W 606 nt13.67□□□□□ -0.22
VPS4P52917 RRD1YIL153W 1182 nt13.66□□□□□ -0.22
VPS4P52917 GFD2YCL036W 1701 nt13.66□□□□□ -0.22
VPS4P52917 PAU16YKL224C 372 nt13.6□□□□□ -0.23
VPS4P52917 YLR235CYLR235C 399 nt13.6□□□□□ -0.23
VPS4P52917 TAT1YBR069C 1860 nt13.59□□□□□ -0.23
VPS4P52917 MEP2YNL142W 1500 nt13.59□□□□□ -0.23
VPS4P52917 LCB1YMR296C 1677 nt13.58□□□□□ -0.24
VPS4P52917 SOR2YDL246C 1074 nt13.55□□□□□ -0.24
VPS4P52917 SOR1YJR159W 1074 nt13.55□□□□□ -0.24
VPS4P52917 FMT1YBL013W 1206 nt13.55□□□□□ -0.24
VPS4P52917 YCL042WYCL042W 360 nt13.52□□□□□ -0.25
VPS4P52917 YFR018CYFR018C 1092 nt13.49□□□□□ -0.25
VPS4P52917 PRE6YOL038W 765 nt13.45□□□□□ -0.26
VPS4P52917 RRT5YFR032C 870 nt13.41□□□□□ -0.26
VPS4P52917 DCW1YKL046C 1350 nt13.4□□□□□ -0.26
VPS4P52917 RTS2YOR077W 699 nt13.39□□□□□ -0.27
VPS4P52917 tL(GAG)GtL(GAG)G 82 nt13.38□□□□□ -0.27
VPS4P52917 TIM23YNR017W 669 nt13.3□□□□□ -0.28
VPS4P52917 FMP52YER004W 696 nt13.29□□□□□ -0.28
VPS4P52917 CWP1YKL096W 720 nt13.28□□□□□ -0.28
VPS4P52917 CUE1YMR264W 612 nt13.26□□□□□ -0.29
VPS4P52917 ADH2YMR303C 1047 nt13.26□□□□□ -0.29
VPS4P52917 IRC15YPL017C 1500 nt13.25□□□□□ -0.29
VPS4P52917 SNF6YHL025W 999 nt13.25□□□□□ -0.29
VPS4P52917 DIC1YLR348C 897 nt13.25□□□□□ -0.29
VPS4P52917 EMI2YDR516C 1503 nt13.23□□□□□ -0.29
VPS4P52917 YLR179CYLR179C 606 nt13.18□□□□□ -0.3
VPS4P52917 YDL221WYDL221W 552 nt13.17□□□□□ -0.3
VPS4P52917 YPR064WYPR064W 420 nt13.16□□□□□ -0.3
VPS4P52917 WSC2YNL283C 1512 nt13.13□□□□□ -0.31
VPS4P52917 YFL066CYFL066C 1179 nt13.13□□□□□ -0.31
VPS4P52917 TAD3YLR316C 969 nt13.13□□□□□ -0.31
VPS4P52917 GIS3YLR094C 1509 nt13.12□□□□□ -0.31
VPS4P52917 YMR090WYMR090W 684 nt13.1□□□□□ -0.31
VPS4P52917 UME6YDR207C 2511 nt13.08□□□□□ -0.32
VPS4P52917 AHT1YHR093W 549 nt13.08□□□□□ -0.32
VPS4P52917 PEX25YPL112C 1185 nt13.06□□□□□ -0.32
VPS4P52917 PCM1YEL058W 1674 nt13.05□□□□□ -0.32
VPS4P52917 NAT4YMR069W 858 nt13.05□□□□□ -0.32
VPS4P52917 YIL100WYIL100W 354 nt13.03□□□□□ -0.32
VPS4P52917 RNQ1YCL028W 1218 nt13.02□□□□□ -0.33
VPS4P52917 YIH1YCR059C 777 nt12.99□□□□□ -0.33
VPS4P52917 YSP3YOR003W 1437 nt12.96□□□□□ -0.34
VPS4P52917 SDH1YKL148C 1923 nt12.94□□□□□ -0.34
VPS4P52917 BDH1YAL060W 1149 nt12.93□□□□□ -0.34
VPS4P52917 YNL115CYNL115C 1935 nt12.92□□□□□ -0.34
VPS4P52917 YMR244WYMR244W 1068 nt12.92□□□□□ -0.34
VPS4P52917 MSF1YPR047W 1410 nt12.92□□□□□ -0.34
VPS4P52917 SCC4YER147C 1875 nt12.91□□□□□ -0.34
VPS4P52917 GLK1YCL040W 1503 nt12.91□□□□□ -0.34
VPS4P52917 YBR220CYBR220C 1683 nt12.89□□□□□ -0.35
VPS4P52917 MIR1YJR077C 936 nt12.86□□□□□ -0.35
VPS4P52917 THI74YDR438W 1113 nt12.83□□□□□ -0.36
VPS4P52917 YSC84YHR016C 1407 nt12.82□□□□□ -0.36
Retrieved 100 of 7,029 protein–RNA pairs in 15.5 ms