Protein–RNA interactions for Protein: P48743

RFX1, RFX-like DNA-binding protein RFX1, yeastyeast

Predictions only

Length 811 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RFX1P48743 YLR154C-GYLR154C-G 150 nt12.61□□□□□ -0.39
RFX1P48743 YLR281CYLR281C 468 nt12.61□□□□□ -0.39
RFX1P48743 EMI2YDR516C 1503 nt12.61□□□□□ -0.39
RFX1P48743 WHI5YOR083W 888 nt12.6□□□□□ -0.39
RFX1P48743 ART5YGR068C 1761 nt12.58□□□□□ -0.39
RFX1P48743 YJL152WYJL152W 360 nt12.55□□□□□ -0.4
RFX1P48743 TIR4YOR009W 1464 nt12.54□□□□□ -0.4
RFX1P48743 YMR090WYMR090W 684 nt12.54□□□□□ -0.4
RFX1P48743 PAC11YDR488C 1602 nt12.53□□□□□ -0.4
RFX1P48743 tM(CAU)CtM(CAU)C 72 nt12.52□□□□□ -0.41
RFX1P48743 IMT4tM(CAU)E 72 nt12.52□□□□□ -0.41
RFX1P48743 IMT3tM(CAU)J3 72 nt12.52□□□□□ -0.41
RFX1P48743 IMT1tM(CAU)O1 72 nt12.52□□□□□ -0.41
RFX1P48743 IMT2tM(CAU)P 72 nt12.52□□□□□ -0.41
RFX1P48743 GFD2YCL036W 1701 nt12.51□□□□□ -0.41
RFX1P48743 PET9YBL030C 957 nt12.51□□□□□ -0.41
RFX1P48743 PUS2YGL063W 1113 nt12.5□□□□□ -0.41
RFX1P48743 YDL221WYDL221W 552 nt12.49□□□□□ -0.41
RFX1P48743 YCH1YGR203W 447 nt12.48□□□□□ -0.41
RFX1P48743 YMR057CYMR057C 372 nt12.44□□□□□ -0.42
RFX1P48743 IRC15YPL017C 1500 nt12.42□□□□□ -0.42
RFX1P48743 RTS2YOR077W 699 nt12.39□□□□□ -0.43
RFX1P48743 YBR220CYBR220C 1683 nt12.35□□□□□ -0.43
RFX1P48743 SDH1YKL148C 1923 nt12.35□□□□□ -0.43
RFX1P48743 GIS3YLR094C 1509 nt12.33□□□□□ -0.44
RFX1P48743 DSK2YMR276W 1122 nt12.32□□□□□ -0.44
RFX1P48743 IMP2'YIL154C 1041 nt12.31□□□□□ -0.44
RFX1P48743 YCL048W-AYCL048W-A 240 nt12.3□□□□□ -0.44
RFX1P48743 SCC4YER147C 1875 nt12.29□□□□□ -0.44
RFX1P48743 IDH1YNL037C 1083 nt12.29□□□□□ -0.44
RFX1P48743 CUE1YMR264W 612 nt12.27□□□□□ -0.45
RFX1P48743 YPR011CYPR011C 981 nt12.27□□□□□ -0.45
RFX1P48743 YLR236CYLR236C 324 nt12.26□□□□□ -0.45
RFX1P48743 FPS1YLL043W 2010 nt12.24□□□□□ -0.45
RFX1P48743 GBP2YCL011C 1284 nt12.21□□□□□ -0.45
RFX1P48743 NVJ2YPR091C 2313 nt12.2□□□□□ -0.46
RFX1P48743 FMP45YDL222C 930 nt12.18□□□□□ -0.46
RFX1P48743 YIL100WYIL100W 354 nt12.14□□□□□ -0.47
RFX1P48743 YDR433WYDR433W 441 nt12.13□□□□□ -0.47
RFX1P48743 LPX1YOR084W 1164 nt12.08□□□□□ -0.48
RFX1P48743 TCD2YKL027W 1344 nt12.07□□□□□ -0.48
RFX1P48743 ERV46YAL042W 1248 nt12.05□□□□□ -0.48
RFX1P48743 MXR2YCL033C 507 nt12.04□□□□□ -0.48
RFX1P48743 RRD1YIL153W 1182 nt12.03□□□□□ -0.48
RFX1P48743 YKR040CYKR040C 504 nt12□□□□□ -0.49
RFX1P48743 YNL195CYNL195C 786 nt12□□□□□ -0.49
RFX1P48743 DED1YOR204W 1815 nt12□□□□□ -0.49
RFX1P48743 YSC84YHR016C 1407 nt11.99□□□□□ -0.49
RFX1P48743 MOT3YMR070W 1473 nt11.98□□□□□ -0.49
RFX1P48743 Q0182Q0182 405 nt11.98□□□□□ -0.49
RFX1P48743 RRT12YCR045C 1476 nt11.97□□□□□ -0.49
RFX1P48743 PCH2YBR186W 1695 nt11.97□□□□□ -0.49
RFX1P48743 GUT2YIL155C 1950 nt11.94□□□□□ -0.5
RFX1P48743 SEC11YIR022W 504 nt11.92□□□□□ -0.5
RFX1P48743 YHL050CYHL050C 2094 nt11.91□□□□□ -0.5
RFX1P48743 FMT1YBL013W 1206 nt11.9□□□□□ -0.5
RFX1P48743 FMP52YER004W 696 nt11.87□□□□□ -0.51
RFX1P48743 SPP1YPL138C 1062 nt11.83□□□□□ -0.52
RFX1P48743 YCL042WYCL042W 360 nt11.83□□□□□ -0.52
RFX1P48743 CWP1YKL096W 720 nt11.82□□□□□ -0.52
RFX1P48743 FRD1YEL047C 1413 nt11.81□□□□□ -0.52
RFX1P48743 ADH2YMR303C 1047 nt11.79□□□□□ -0.52
RFX1P48743 SOR2YDL246C 1074 nt11.78□□□□□ -0.52
RFX1P48743 SOR1YJR159W 1074 nt11.78□□□□□ -0.52
RFX1P48743 PCM1YEL058W 1674 nt11.78□□□□□ -0.52
RFX1P48743 PIB2YGL023C 1908 nt11.76□□□□□ -0.53
RFX1P48743 SNF6YHL025W 999 nt11.71□□□□□ -0.53
RFX1P48743 SIM1YIL123W 1431 nt11.63□□□□□ -0.55
RFX1P48743 PTH1YHR189W 573 nt11.63□□□□□ -0.55
RFX1P48743 LCB1YMR296C 1677 nt11.61□□□□□ -0.55
RFX1P48743 RTF1YGL244W 1677 nt11.6□□□□□ -0.55
RFX1P48743 BOP3YNL042W 1191 nt11.59□□□□□ -0.55
RFX1P48743 BIO4YNR057C 714 nt11.57□□□□□ -0.56
RFX1P48743 YIH1YCR059C 777 nt11.56□□□□□ -0.56
RFX1P48743 YLR235CYLR235C 399 nt11.56□□□□□ -0.56
RFX1P48743 RNQ1YCL028W 1218 nt11.56□□□□□ -0.56
RFX1P48743 NCP1YHR042W 2076 nt11.56□□□□□ -0.56
RFX1P48743 DIC1YLR348C 897 nt11.55□□□□□ -0.56
RFX1P48743 RTG1YOL067C 534 nt11.53□□□□□ -0.56
RFX1P48743 YKL030WYKL030W 606 nt11.49□□□□□ -0.57
RFX1P48743 YLL053CYLL053C 459 nt11.49□□□□□ -0.57
RFX1P48743 MRPL8YJL063C 717 nt11.47□□□□□ -0.57
RFX1P48743 YEL076C-AYEL076C-A 651 nt11.46□□□□□ -0.57
RFX1P48743 YEL076CYEL076C 651 nt11.46□□□□□ -0.57
RFX1P48743 YLR464WYLR464W 651 nt11.46□□□□□ -0.57
RFX1P48743 TIM23YNR017W 669 nt11.45□□□□□ -0.58
RFX1P48743 PTK1YKL198C 1989 nt11.45□□□□□ -0.58
RFX1P48743 YJL225CYJL225C 5277 nt11.43□□□□□ -0.58
RFX1P48743 ADO1YJR105W 1023 nt11.41□□□□□ -0.58
RFX1P48743 FTR1YER145C 1215 nt11.4□□□□□ -0.58
RFX1P48743 YLR179CYLR179C 606 nt11.4□□□□□ -0.58
RFX1P48743 ERF2YLR246W 1080 nt11.39□□□□□ -0.59
RFX1P48743 HUA1YGR268C 597 nt11.37□□□□□ -0.59
RFX1P48743 GAL1YBR020W 1587 nt11.37□□□□□ -0.59
RFX1P48743 UME6YDR207C 2511 nt11.36□□□□□ -0.59
RFX1P48743 LYS4YDR234W 2082 nt11.36□□□□□ -0.59
RFX1P48743 TRM5YHR070W 1500 nt11.35□□□□□ -0.59
RFX1P48743 ATF2YGR177C 1608 nt11.34□□□□□ -0.59
RFX1P48743 CRR1YLR213C 1269 nt11.32□□□□□ -0.6
RFX1P48743 YFL067WYFL067W 528 nt11.31□□□□□ -0.6
Retrieved 100 of 7,029 protein–RNA pairs in 282 ms