Protein–RNA interactions for Protein: P46970

NMD5, Nonsense-mediated mRNA decay protein 5, yeastyeast

Predictions only

Length 1,048 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NMD5P46970 YKL097CYKL097C 411 nt12.92□□□□□ -0.34
NMD5P46970 IRC15YPL017C 1500 nt12.9□□□□□ -0.34
NMD5P46970 ART5YGR068C 1761 nt12.89□□□□□ -0.35
NMD5P46970 RKM5YLR137W 1104 nt12.88□□□□□ -0.35
NMD5P46970 GFD2YCL036W 1701 nt12.86□□□□□ -0.35
NMD5P46970 GIS3YLR094C 1509 nt12.82□□□□□ -0.36
NMD5P46970 SCC4YER147C 1875 nt12.8□□□□□ -0.36
NMD5P46970 RTS2YOR077W 699 nt12.79□□□□□ -0.36
NMD5P46970 TIR4YOR009W 1464 nt12.75□□□□□ -0.37
NMD5P46970 PET9YBL030C 957 nt12.71□□□□□ -0.37
NMD5P46970 YMR057CYMR057C 372 nt12.63□□□□□ -0.39
NMD5P46970 NPL3YDR432W 1245 nt12.62□□□□□ -0.39
NMD5P46970 YCH1YGR203W 447 nt12.6□□□□□ -0.39
NMD5P46970 CUE1YMR264W 612 nt12.58□□□□□ -0.4
NMD5P46970 PCH2YBR186W 1695 nt12.57□□□□□ -0.4
NMD5P46970 YSC84YHR016C 1407 nt12.56□□□□□ -0.4
NMD5P46970 YOL037CYOL037C 354 nt12.55□□□□□ -0.4
NMD5P46970 YOR139CYOR139C 393 nt12.54□□□□□ -0.4
NMD5P46970 FPS1YLL043W 2010 nt12.54□□□□□ -0.4
NMD5P46970 YLR154C-GYLR154C-G 150 nt12.53□□□□□ -0.4
NMD5P46970 YHL050CYHL050C 2094 nt12.53□□□□□ -0.4
NMD5P46970 GUT2YIL155C 1950 nt12.52□□□□□ -0.4
NMD5P46970 YJL152WYJL152W 360 nt12.51□□□□□ -0.41
NMD5P46970 SEC11YIR022W 504 nt12.5□□□□□ -0.41
NMD5P46970 RRT12YCR045C 1476 nt12.48□□□□□ -0.41
NMD5P46970 PIB2YGL023C 1908 nt12.41□□□□□ -0.42
NMD5P46970 YIL100WYIL100W 354 nt12.4□□□□□ -0.42
NMD5P46970 YCL048W-AYCL048W-A 240 nt12.36□□□□□ -0.43
NMD5P46970 WHI5YOR083W 888 nt12.35□□□□□ -0.43
NMD5P46970 YLR236CYLR236C 324 nt12.34□□□□□ -0.43
NMD5P46970 YLR281CYLR281C 468 nt12.33□□□□□ -0.44
NMD5P46970 YNL195CYNL195C 786 nt12.31□□□□□ -0.44
NMD5P46970 RTF1YGL244W 1677 nt12.26□□□□□ -0.45
NMD5P46970 NCP1YHR042W 2076 nt12.17□□□□□ -0.46
NMD5P46970 RRD1YIL153W 1182 nt12.17□□□□□ -0.46
NMD5P46970 PAC11YDR488C 1602 nt12.17□□□□□ -0.46
NMD5P46970 IDH1YNL037C 1083 nt12.15□□□□□ -0.46
NMD5P46970 BOP3YNL042W 1191 nt12.15□□□□□ -0.46
NMD5P46970 PTK1YKL198C 1989 nt12.14□□□□□ -0.47
NMD5P46970 GBP2YCL011C 1284 nt12.13□□□□□ -0.47
NMD5P46970 DED1YOR204W 1815 nt12.13□□□□□ -0.47
NMD5P46970 PUS2YGL063W 1113 nt12.11□□□□□ -0.47
NMD5P46970 LCB1YMR296C 1677 nt12.07□□□□□ -0.48
NMD5P46970 YPR011CYPR011C 981 nt12.07□□□□□ -0.48
NMD5P46970 tM(CAU)CtM(CAU)C 72 nt12.06□□□□□ -0.48
NMD5P46970 IMT4tM(CAU)E 72 nt12.06□□□□□ -0.48
NMD5P46970 IMT3tM(CAU)J3 72 nt12.06□□□□□ -0.48
NMD5P46970 IMT1tM(CAU)O1 72 nt12.06□□□□□ -0.48
NMD5P46970 IMT2tM(CAU)P 72 nt12.06□□□□□ -0.48
NMD5P46970 DSK2YMR276W 1122 nt12.05□□□□□ -0.48
NMD5P46970 FMT1YBL013W 1206 nt12.03□□□□□ -0.48
NMD5P46970 TCD2YKL027W 1344 nt12.03□□□□□ -0.48
NMD5P46970 MXR2YCL033C 507 nt11.99□□□□□ -0.49
NMD5P46970 YDR433WYDR433W 441 nt11.97□□□□□ -0.49
NMD5P46970 IMP2'YIL154C 1041 nt11.97□□□□□ -0.49
NMD5P46970 PCM1YEL058W 1674 nt11.97□□□□□ -0.49
NMD5P46970 FMP52YER004W 696 nt11.96□□□□□ -0.49
NMD5P46970 FMP45YDL222C 930 nt11.94□□□□□ -0.5
NMD5P46970 ADH2YMR303C 1047 nt11.92□□□□□ -0.5
NMD5P46970 CWP1YKL096W 720 nt11.9□□□□□ -0.5
NMD5P46970 LPX1YOR084W 1164 nt11.9□□□□□ -0.5
NMD5P46970 SIM1YIL123W 1431 nt11.87□□□□□ -0.51
NMD5P46970 YFL054CYFL054C 1941 nt11.86□□□□□ -0.51
NMD5P46970 ERV46YAL042W 1248 nt11.85□□□□□ -0.51
NMD5P46970 LYS4YDR234W 2082 nt11.84□□□□□ -0.51
NMD5P46970 SNF6YHL025W 999 nt11.82□□□□□ -0.52
NMD5P46970 BIO4YNR057C 714 nt11.82□□□□□ -0.52
NMD5P46970 SOR2YDL246C 1074 nt11.81□□□□□ -0.52
NMD5P46970 SOR1YJR159W 1074 nt11.81□□□□□ -0.52
NMD5P46970 SPT8YLR055C 1809 nt11.79□□□□□ -0.52
NMD5P46970 Q0182Q0182 405 nt11.78□□□□□ -0.52
NMD5P46970 FRD1YEL047C 1413 nt11.77□□□□□ -0.52
NMD5P46970 YKR040CYKR040C 504 nt11.77□□□□□ -0.53
NMD5P46970 YCL042WYCL042W 360 nt11.76□□□□□ -0.53
NMD5P46970 NVJ2YPR091C 2313 nt11.71□□□□□ -0.54
NMD5P46970 YIH1YCR059C 777 nt11.67□□□□□ -0.54
NMD5P46970 YLL053CYLL053C 459 nt11.64□□□□□ -0.55
NMD5P46970 YJL225CYJL225C 5277 nt11.63□□□□□ -0.55
NMD5P46970 RNQ1YCL028W 1218 nt11.62□□□□□ -0.55
NMD5P46970 CRR1YLR213C 1269 nt11.61□□□□□ -0.55
NMD5P46970 SWE1YJL187C 2460 nt11.59□□□□□ -0.55
NMD5P46970 ERF2YLR246W 1080 nt11.59□□□□□ -0.55
NMD5P46970 SPP1YPL138C 1062 nt11.58□□□□□ -0.56
NMD5P46970 ATF2YGR177C 1608 nt11.57□□□□□ -0.56
NMD5P46970 DIC1YLR348C 897 nt11.56□□□□□ -0.56
NMD5P46970 MIC10YCL057C-A 294 nt11.55□□□□□ -0.56
NMD5P46970 FTR1YER145C 1215 nt11.51□□□□□ -0.57
NMD5P46970 PTH1YHR189W 573 nt11.51□□□□□ -0.57
NMD5P46970 TRM5YHR070W 1500 nt11.5□□□□□ -0.57
NMD5P46970 GAL1YBR020W 1587 nt11.5□□□□□ -0.57
NMD5P46970 SNG1YGR197C 1644 nt11.49□□□□□ -0.57
NMD5P46970 HEM12YDR047W 1089 nt11.48□□□□□ -0.57
NMD5P46970 YHR056W-AYHR056W-A 435 nt11.48□□□□□ -0.57
NMD5P46970 YFL067WYFL067W 528 nt11.43□□□□□ -0.58
NMD5P46970 MOT3YMR070W 1473 nt11.42□□□□□ -0.58
NMD5P46970 DDR2YOL052C-A 186 nt11.39□□□□□ -0.59
NMD5P46970 BOR1YNL275W 1731 nt11.37□□□□□ -0.59
NMD5P46970 CCA1YER168C 1641 nt11.35□□□□□ -0.59
NMD5P46970 YDL086C-AYDL086C-A 435 nt11.35□□□□□ -0.59
NMD5P46970 YLR235CYLR235C 399 nt11.35□□□□□ -0.59
Retrieved 100 of 7,029 protein–RNA pairs in 7.9 ms