Protein–RNA interactions for Protein: P41817

CUP9, Homeobox protein CUP9, yeastyeast

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CUP9P41817 DSK2YMR276W 1122 nt11.28□□□□□ -0.6
CUP9P41817 MOT3YMR070W 1473 nt11.27□□□□□ -0.6
CUP9P41817 FMP45YDL222C 930 nt11.22□□□□□ -0.61
CUP9P41817 YPR011CYPR011C 981 nt11.19□□□□□ -0.62
CUP9P41817 YLR236CYLR236C 324 nt11.18□□□□□ -0.62
CUP9P41817 YHR165W-AYHR165W-A 312 nt11.17□□□□□ -0.62
CUP9P41817 SIS1YNL007C 1059 nt11.17□□□□□ -0.62
CUP9P41817 YJL152WYJL152W 360 nt11.15□□□□□ -0.62
CUP9P41817 YCH1YGR203W 447 nt11.13□□□□□ -0.63
CUP9P41817 IDH1YNL037C 1083 nt11.07□□□□□ -0.64
CUP9P41817 RPP2AYOL039W 321 nt11.07□□□□□ -0.64
CUP9P41817 TIR4YOR009W 1464 nt11.03□□□□□ -0.64
CUP9P41817 ERV46YAL042W 1248 nt11.01□□□□□ -0.65
CUP9P41817 SSA4YER103W 1929 nt11.01□□□□□ -0.65
CUP9P41817 MEP2YNL142W 1500 nt11□□□□□ -0.65
CUP9P41817 LPX1YOR084W 1164 nt10.99□□□□□ -0.65
CUP9P41817 MRPL8YJL063C 717 nt10.97□□□□□ -0.65
CUP9P41817 PTP1YDL230W 1008 nt10.96□□□□□ -0.65
CUP9P41817 YDR433WYDR433W 441 nt10.95□□□□□ -0.66
CUP9P41817 PET9YBL030C 957 nt10.95□□□□□ -0.66
CUP9P41817 ART5YGR068C 1761 nt10.94□□□□□ -0.66
CUP9P41817 GBP2YCL011C 1284 nt10.93□□□□□ -0.66
CUP9P41817 CAC2YML102W 1407 nt10.92□□□□□ -0.66
CUP9P41817 YKR040CYKR040C 504 nt10.9□□□□□ -0.66
CUP9P41817 YCL048W-AYCL048W-A 240 nt10.88□□□□□ -0.67
CUP9P41817 GFD2YCL036W 1701 nt10.87□□□□□ -0.67
CUP9P41817 YMR057CYMR057C 372 nt10.87□□□□□ -0.67
CUP9P41817 SPP1YPL138C 1062 nt10.84□□□□□ -0.67
CUP9P41817 ADO1YJR105W 1023 nt10.83□□□□□ -0.68
CUP9P41817 DCW1YKL046C 1350 nt10.81□□□□□ -0.68
CUP9P41817 MXR2YCL033C 507 nt10.8□□□□□ -0.68
CUP9P41817 TCD2YKL027W 1344 nt10.79□□□□□ -0.68
CUP9P41817 YEL076C-AYEL076C-A 651 nt10.78□□□□□ -0.68
CUP9P41817 YEL076CYEL076C 651 nt10.78□□□□□ -0.68
CUP9P41817 YLR464WYLR464W 651 nt10.78□□□□□ -0.68
CUP9P41817 RTG1YOL067C 534 nt10.75□□□□□ -0.69
CUP9P41817 EMI2YDR516C 1503 nt10.73□□□□□ -0.69
CUP9P41817 FPS1YLL043W 2010 nt10.7□□□□□ -0.7
CUP9P41817 RTS2YOR077W 699 nt10.69□□□□□ -0.7
CUP9P41817 YMR090WYMR090W 684 nt10.68□□□□□ -0.7
CUP9P41817 YDL221WYDL221W 552 nt10.67□□□□□ -0.7
CUP9P41817 RRD1YIL153W 1182 nt10.66□□□□□ -0.7
CUP9P41817 IRC15YPL017C 1500 nt10.66□□□□□ -0.7
CUP9P41817 CUE1YMR264W 612 nt10.65□□□□□ -0.7
CUP9P41817 DED1YOR204W 1815 nt10.65□□□□□ -0.71
CUP9P41817 BDF1YLR399C 2061 nt10.64□□□□□ -0.71
CUP9P41817 FRD1YEL047C 1413 nt10.62□□□□□ -0.71
CUP9P41817 HUA1YGR268C 597 nt10.6□□□□□ -0.71
CUP9P41817 YCL042WYCL042W 360 nt10.58□□□□□ -0.72
CUP9P41817 SOR2YDL246C 1074 nt10.56□□□□□ -0.72
CUP9P41817 SOR1YJR159W 1074 nt10.56□□□□□ -0.72
CUP9P41817 GIS3YLR094C 1509 nt10.56□□□□□ -0.72
CUP9P41817 YBR220CYBR220C 1683 nt10.53□□□□□ -0.72
CUP9P41817 FMP52YER004W 696 nt10.53□□□□□ -0.72
CUP9P41817 YIL100WYIL100W 354 nt10.53□□□□□ -0.72
CUP9P41817 UBX6YJL048C 1191 nt10.53□□□□□ -0.72
CUP9P41817 FMT1YBL013W 1206 nt10.53□□□□□ -0.72
CUP9P41817 YLR235CYLR235C 399 nt10.51□□□□□ -0.73
CUP9P41817 TAT1YBR069C 1860 nt10.5□□□□□ -0.73
CUP9P41817 SDH1YKL148C 1923 nt10.48□□□□□ -0.73
CUP9P41817 PTH1YHR189W 573 nt10.48□□□□□ -0.73
CUP9P41817 YKL030WYKL030W 606 nt10.48□□□□□ -0.73
CUP9P41817 SCC4YER147C 1875 nt10.47□□□□□ -0.73
CUP9P41817 YDR094WYDR094W 336 nt10.42□□□□□ -0.74
CUP9P41817 CWP1YKL096W 720 nt10.42□□□□□ -0.74
CUP9P41817 LCB1YMR296C 1677 nt10.38□□□□□ -0.75
CUP9P41817 ADH2YMR303C 1047 nt10.38□□□□□ -0.75
CUP9P41817 PCM1YEL058W 1674 nt10.32□□□□□ -0.76
CUP9P41817 SNF6YHL025W 999 nt10.32□□□□□ -0.76
CUP9P41817 YNL195CYNL195C 786 nt10.31□□□□□ -0.76
CUP9P41817 DIC1YLR348C 897 nt10.3□□□□□ -0.76
CUP9P41817 TIM23YNR017W 669 nt10.3□□□□□ -0.76
CUP9P41817 RNQ1YCL028W 1218 nt10.25□□□□□ -0.77
CUP9P41817 YIH1YCR059C 777 nt10.24□□□□□ -0.77
CUP9P41817 tL(GAG)GtL(GAG)G 82 nt10.24□□□□□ -0.77
CUP9P41817 YLR179CYLR179C 606 nt10.23□□□□□ -0.77
CUP9P41817 YFL015W-AYFL015W-A 318 nt10.21□□□□□ -0.77
CUP9P41817 YPR064WYPR064W 420 nt10.2□□□□□ -0.78
CUP9P41817 SEC11YIR022W 504 nt10.17□□□□□ -0.78
CUP9P41817 RRT12YCR045C 1476 nt10.17□□□□□ -0.78
CUP9P41817 PCH2YBR186W 1695 nt10.16□□□□□ -0.78
CUP9P41817 YFR018CYFR018C 1092 nt10.15□□□□□ -0.78
CUP9P41817 YSC84YHR016C 1407 nt10.15□□□□□ -0.79
CUP9P41817 TAD3YLR316C 969 nt10.14□□□□□ -0.79
CUP9P41817 AHT1YHR093W 549 nt10.13□□□□□ -0.79
CUP9P41817 GUT2YIL155C 1950 nt10.12□□□□□ -0.79
CUP9P41817 YHL050CYHL050C 2094 nt10.12□□□□□ -0.79
CUP9P41817 WSC2YNL283C 1512 nt10.12□□□□□ -0.79
CUP9P41817 YLL053CYLL053C 459 nt10.11□□□□□ -0.79
CUP9P41817 AQY1YPR192W 918 nt10.11□□□□□ -0.79
CUP9P41817 RRT5YFR032C 870 nt10.1□□□□□ -0.79
CUP9P41817 BIO4YNR057C 714 nt10.1□□□□□ -0.79
CUP9P41817 PAU16YKL224C 372 nt10.09□□□□□ -0.79
CUP9P41817 SIM1YIL123W 1431 nt10.08□□□□□ -0.8
CUP9P41817 FTR1YER145C 1215 nt10.07□□□□□ -0.8
CUP9P41817 GAL1YBR020W 1587 nt10.03□□□□□ -0.8
CUP9P41817 PRE6YOL038W 765 nt10.01□□□□□ -0.81
CUP9P41817 PIB2YGL023C 1908 nt10.01□□□□□ -0.81
CUP9P41817 PAC11YDR488C 1602 nt9.99□□□□□ -0.81
CUP9P41817 TRM5YHR070W 1500 nt9.98□□□□□ -0.81
Retrieved 100 of 7,029 protein–RNA pairs in 82.4 ms